RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 TSPAN10Q9H1Z9 355 aaPredicted RBP9.91□□□□□ -0.82
CXCL12-203ENST00000374429 SYT4Q9H2B2 425 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 ACOXLQ9NUZ1 547 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 PCDHGB1Q9Y5G3 927 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 ENTPD2Q9Y5L3 495 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 PLXNA2O75051 1894 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 LOC100509620A0A075B734 347 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 OR5K4A6NMS3 321 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 ZNHIT1O43257 154 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 SLITRK5O94991 958 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 SLC35E2P0CK97 266 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 SRFP11831 508 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 CXCL12P48061 93 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 C19orf57Q0VDD7 668 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 C21orf62-AS1Q17RA5 79 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 GLYR1Q49A26 553 aaPredicted RBP9.91□□□□□ -0.82
CXCL12-203ENST00000374429 ARSKQ6UWY0 536 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 NSMAFQ92636 917 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 AKAP1Q92667 903 aaKnown RBP eCLIP9.91□□□□□ -0.82
CXCL12-203ENST00000374429 ZDHHC12Q96GR4 267 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 CDCA4Q9BXL8 241 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 B3GAT2Q9NPZ5 323 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 NUP50Q9UKX7 468 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 TMEM5Q9Y2B1 443 aa9.91□□□□□ -0.82
CXCL12-203ENST00000374429 CCDC182A6NF36 153 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 BRINP1O60477 761 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 CAPZBP47756 277 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 UBE2IP63279 158 aaKnown RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 DPY19L4Q7Z388 723 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 YIPF7Q8N8F6 280 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 OR1L3Q8NH93 324 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 PCNPQ8WW12 178 aaKnown RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 KTI12Q96EK9 354 aaPredicted RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 SGTBQ96EQ0 304 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 SLC25A19Q9HC21 320 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 SLC2A4RGQ9NR83 387 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 PLCXD1Q9NUJ7 323 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF224Q9NZL3 707 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 CNOT2Q9NZN8 540 aaKnown RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 NOSIPQ9Y314 301 aaKnown RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 HS3ST3A1Q9Y663 406 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 A0A0G2JMP0 313 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 A0A0X1KG70 313 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 TOXO94900 526 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 CSN2P05814 226 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 SYPP08247 313 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 IL7P13232 177 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 HK1P19367 917 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 FBLP22087 321 aaKnown RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 TALDO1P37837 337 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 STAT5AP42229 794 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 SNRPGP62308 76 aaKnown RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 SLC25A35Q3KQZ1 300 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 ATAD3CQ5T2N8 411 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 GUSBP11Q6P575 273 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 OR4M2Q8NGB6 313 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 PRSS27Q9BQR3 290 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 PITHD1Q9GZP4 211 aaPredicted RBP9.9□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF350Q9GZX5 532 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 COPS7AQ9UBW8 275 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 CYB5R1Q9UHQ9 305 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 PLCL2Q9UPR0 1127 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 FREM3P0C091 2139 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 KIF26BQ2KJY2 2108 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 LTBP2Q14767 1821 aa9.9□□□□□ -0.82
CXCL12-203ENST00000374429 HLA-DPB1P04440 258 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 CT45A8P0DMV1 189 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 CT45A9P0DMV2 189 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 CD27P26842 260 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 EEF1A1P68104 462 aaKnown RBP9.9□□□□□ -0.83
CXCL12-203ENST00000374429 FOXK1P85037 733 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 ETFDHQ16134 617 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 CT45A2Q5DJT8 189 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 GARNL3Q5VVW2 1013 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 MEDAGQ5VYS4 303 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 FAAP20Q6NZ36 180 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 MEPCEQ7L2J0 689 aaKnown RBP9.9□□□□□ -0.83
CXCL12-203ENST00000374429 SNX18Q96RF0 628 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 SAV1Q9H4B6 383 aaPredicted RBP9.9□□□□□ -0.83
CXCL12-203ENST00000374429 ZMAT3Q9HA38 289 aaKnown RBP9.9□□□□□ -0.83
CXCL12-203ENST00000374429 MED11Q9P086 117 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 SERTAD3Q9UJW9 196 aa9.9□□□□□ -0.83
CXCL12-203ENST00000374429 DIMT1Q9UNQ2 313 aaKnown RBP9.9□□□□□ -0.83
CXCL12-203ENST00000374429 METTL12A8MUP2 240 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 PRAMEF2O60811 474 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 CTNSO60931 367 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 IFNGP01579 166 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 SPARCP09486 303 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 FPR3P25089 353 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 RPL35P42766 123 aaKnown RBP9.89□□□□□ -0.83
CXCL12-203ENST00000374429 FXYD6P3P58550 94 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 SCRN3Q0VDG4 424 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 RAB40BQ12829 278 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 ACSM3Q53FZ2 586 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 FAM209BQ5JX69 171 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 PLET1Q6UQ28 207 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 SYT13Q7L8C5 426 aa9.89□□□□□ -0.83
CXCL12-203ENST00000374429 ASB15Q8WXK1 588 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms