RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FAM47E-STBD1D6RA91 191 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SOCS6O14544 535 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CTDSP2O14595 271 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 TBX1O43435 398 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 HCRTR2O43614 444 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SULT1B1O43704 296 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 TMCC2O75069 709 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CPNE3O75131 537 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 NPIPB7O75200 414 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ALOX12BO75342 701 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 RFPL3O75679 317 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SCRG1O75711 98 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CDC123O75794 336 aaPredicted RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 DXOO77932 396 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 OR6A2O95222 327 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 PPP1R3DO95685 299 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 KLK3P07288 261 aaPredicted RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ICAM2P13598 275 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 FOLR1P15328 257 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 HIST1H1CP16403 213 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SPI1P17947 270 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CFPP27918 469 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SEPHS1P49903 392 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CCR9P51686 369 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC16A1P53985 500 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 RAB25P57735 213 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CFHR1Q03591 330 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SIGLEC14Q08ET2 396 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 FOXD4Q12950 439 aaPredicted RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CDK5R1Q15078 307 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CCDC85BQ15834 202 aaPredicted RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 EXT1Q16394 746 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 FDX2Q6P4F2 183 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 KCTD18Q6PI47 426 aaPredicted RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 DEGS2Q6QHC5 323 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM205Q6UW68 189 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM131AQ6UXB0 335 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 LRRN1Q6UXK5 716 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 UNQ9370/PRO34162Q6UXP9 181 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM122BQ7Z309 247 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 BCDIN3DQ7Z5W3 292 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 HMGN2P46Q86SG4 172 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ZAR1Q86SH2 424 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 MARCH9Q86YJ5 346 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SFTPA2Q8IWL1 248 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC35F2Q8IXU6 374 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 LRRC75AQ8NAA5 344 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SYT14Q8NB59 555 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 OR5J2Q8NH18 312 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 MFSD8Q8NHS3 518 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 STT3BQ8TCJ2 826 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ASB15Q8WXK1 588 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ADAMTS14Q8WXS8 1223 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 DDIT4LQ96D03 193 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 OMA1Q96E52 524 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 KLHL15Q96M94 604 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ADOQ96SZ5 270 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 KCNJ15Q99712 375 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 NUDT9Q9BW91 350 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 BARHL1Q9BZE3 327 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 OR51V1Q9H2C8 321 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 SERINC1Q9NRX5 453 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 MRPL39Q9NYK5 338 aaKnown RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 DTX4Q9Y2E6 619 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 CARD8Q9Y2G2 431 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 NTNG1Q9Y2I2 539 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF281Q9Y2X9 895 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 TMEM184BQ9Y519 407 aaPredicted RBP7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 V9GYH0 126 aa7.94□□□□□ -1.14
SNRNP40-202ENST00000373720 IGKV1D-42A0A075B6H8 117 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NPIPA5A0A0B4J1W7 369 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 LOC102725191A0A1B0GVB3 256 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 A0A1W2PRG6 482 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 CENPXA8MT69 81 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 B4E171 279 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NPIPA7E9PJI5 369 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 HRKO00198 91 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TP53I11O14683 189 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 CTDSPLO15194 276 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 FLRT2O43155 660 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ZNF254O75437 659 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 AHSA1O95433 338 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 SLC2A10O95528 541 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 LDOC1O95751 146 aaPredicted RBP7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 KRT8P05787 483 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 ADRA2AP08913 450 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 UCHL1P09936 223 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NPIPA8P0DM63 369 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 PRKAR1AP10644 381 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TDGF1P13385 188 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 NPR2P20594 1047 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 BCKDHBP21953 392 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 TACR3P29371 465 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 DCTDP32321 178 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 CSF2RBP32927 897 aa7.93□□□□□ -1.14
SNRNP40-202ENST00000373720 EVI2BP34910 448 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms