RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 DAPK2Q9UIK4 370 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 SLC6A5Q9Y345 797 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 SERPINI2O75830 405 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 UPK1BO75841 260 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 CCL4P13236 92 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TNFSF8P32971 234 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 OR12D2P58182 307 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 RUNX1T1Q06455 604 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 COL28A1Q2UY09 1125 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 LEG1Q6P5S2 330 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TMEM91Q6ZNR0 172 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 GPALPP1Q8IXQ4 340 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 LSM14AQ8ND56 463 aaKnown RBP17.78■□□□□ 0.44
HDAC1-201ENST00000373548 OR8K3Q8NH51 312 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 HGDQ93099 445 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TRAV36DV7A0A075B6V5 113 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TMED7-TICAM2A0A0A6YYA0 188 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 CD8B2A6NJW9 211 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 J3QLW9 94 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 GAAP10253 952 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 CD8BP10966 210 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 ZNF19P17023 458 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 NAA10P41227 235 aaPredicted RBP17.78■□□□□ 0.44
HDAC1-201ENST00000373548 POLR2HP52434 150 aaKnown RBP17.78■□□□□ 0.44
HDAC1-201ENST00000373548 OXA1LQ15070 435 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 SLC35D3Q5M8T2 416 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TCEAL6Q6IPX3 200 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 FAM199XQ6PEV8 388 aaPredicted RBP17.78■□□□□ 0.44
HDAC1-201ENST00000373548 VASH1Q7L8A9 365 aaPredicted RBP17.78■□□□□ 0.44
HDAC1-201ENST00000373548 ZBTB44Q8NCP5 570 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TCEAL3Q969E4 200 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 DNAJA3Q96EY1 480 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TAS2R10Q9NYW0 307 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 C19orf25Q9UFG5 118 aaPredicted RBP17.78■□□□□ 0.44
HDAC1-201ENST00000373548 TMED7Q9Y3B3 224 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 NOX1Q9Y5S8 564 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 KIF26BQ2KJY2 2108 aa17.78■□□□□ 0.44
HDAC1-201ENST00000373548 BDP1A6H8Y1 2624 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 SMIM30A4D0T7 59 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 SUSD5O60279 629 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 TXNDC12O95881 172 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 SDHAP31040 664 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 PSMD7P51665 324 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 IL10RAQ13651 578 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.77■□□□□ 0.443e-10■□□□□ 9.3
HDAC1-201ENST00000373548 SPANXN2Q5MJ10 180 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 ADGRG3Q86Y34 549 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 MISPQ8IVT2 679 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 PMEPA1Q969W9 287 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 CEP19Q96LK0 163 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 PTDSS2Q9BVG9 487 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 WDR54Q9H977 334 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 ABCB10Q9NRK6 738 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 FRYLO94915 3013 aa17.77■□□□□ 0.44
HDAC1-201ENST00000373548 CPAMD8Q8IZJ3 1885 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 TMEM72A0PK05 275 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 C2orf72A6NCS6 295 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 B4DXG7 233 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 DVL2O14641 736 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 RGS5O15539 181 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 TBX1O43435 398 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 NPIPB7O75200 414 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 SLC25A12O75746 678 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 HIST1H2ABP04908 130 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 CYC1P08574 325 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 OR2T7P0C7T2 308 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 GALP22466 123 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 E2F1Q01094 437 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 TRIM16LQ309B1 348 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 OR5M10Q6IEU7 315 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 HIST3H2AQ7L7L0 130 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 GRINAQ7Z429 371 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 JAZF1Q86VZ6 243 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 SLC35F2Q8IXU6 374 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 OR5L2Q8NGL0 311 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 OR2T27Q8NH04 317 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 OR5J2Q8NH18 312 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 HIST1H2ACQ93077 130 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 SLC30A2Q9BRI3 323 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 TTTY10Q9BZA0 68 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 POLHQ9Y253 713 aa17.77■□□□□ 0.43
HDAC1-201ENST00000373548 SHISA3A0PJX4 238 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 SELENOFO60613 162 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 PFDN1O60925 122 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 RGS9O75916 674 aaPredicted RBP17.76■□□□□ 0.43
HDAC1-201ENST00000373548 SP9P0CG40 484 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 MC2RQ01718 297 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 LINC01590Q5TEZ4 76 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 ARL9Q6T311 187 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 LYPD4Q6UWN0 246 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 LYSMD2Q8IV50 215 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 LAX1Q8IWV1 398 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 EXD3Q8N9H8 876 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 FAM83FQ8NEG4 500 aaPredicted RBP17.76■□□□□ 0.43
HDAC1-201ENST00000373548 OR6K6Q8NGW6 343 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 NEIL3Q8TAT5 605 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 ASB15Q8WXK1 588 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 TMCO6Q96DC7 493 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 TSPAN32Q96QS1 320 aa17.76■□□□□ 0.43
HDAC1-201ENST00000373548 GALNT9Q9HCQ5 603 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms