RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 RPS5P46782 204 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 CAPZA2P47755 286 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 NR0B1P51843 470 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 ZNF117Q03924 483 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 ELAVL1Q15717 326 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 NSDHLQ15738 373 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 TRILQ7L0X0 811 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 SIX5Q8N196 739 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 SDR16C5Q8N3Y7 309 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 LRRC75AQ8NAA5 344 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 ZNF511Q8NB15 262 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 ST6GAL2Q96JF0 529 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 PDCD1LG2Q9BQ51 273 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 NEK6Q9HC98 313 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 ZNF304Q9HCX3 659 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 HIF3AQ9Y2N7 669 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 NUP210LQ5VU65 1888 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 TCRBV16S1A1N1A0A5B0 115 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 LYRM1O43325 122 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 DUX1O43812 170 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 IDH3BO43837 385 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 FOXL2P58012 376 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 CTXN1P60606 82 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 EBPQ15125 230 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 QPRTQ15274 297 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 SLC35D3Q5M8T2 416 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 LINC01590Q5TEZ4 76 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 POMZP3Q6PJE2 187 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 LRRC28Q86X40 367 aaPredicted RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 PLXDC1Q8IUK5 500 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 GPR135Q8IZ08 494 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 D2HGDHQ8N465 521 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 LSM14AQ8ND56 463 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 TRMT10AQ8TBZ6 339 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 KCTD12Q96CX2 325 aaKnown RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 FRMD6Q96NE9 622 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 UBL7Q96S82 380 aaPredicted RBP17.07■□□□□ 0.32
USP49-202ENST00000373010 ALG12Q9BV10 488 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 VCANP13611 3396 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 A0A0B4J203 849 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 TRBV2A0A0J9YWF9 115 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 PRR32B1ATL7 298 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 NUDT21O43809 227 aaKnown RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 CD14P08571 375 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 PSKH1P11801 424 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 RAB3BP20337 219 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 RPS11P62280 158 aaKnown RBP eCLIP17.06■□□□□ 0.32
USP49-202ENST00000373010 TOMM34Q15785 309 aaPredicted RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 ISXQ2M1V0 245 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 TBRG1Q3YBR2 411 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 ALG10Q5BKT4 473 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 FAM122BQ7Z309 247 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 MARCH3Q86UD3 253 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 JAZF1Q86VZ6 243 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 CCNL2Q96S94 520 aaPredicted RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 LPAR4Q99677 370 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 DPYSL5Q9BPU6 564 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 TTYH2Q9BSA4 534 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 WACQ9BTA9 647 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 RBFOX1Q9NWB1 397 aaKnown RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 PCNX3Q9H6A9 2034 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 KHNYNO15037 678 aaKnown RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 HCRTR2O43614 444 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 GLCEO94923 617 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 WISP1O95388 367 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 ASAH2BP0C7U1 165 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 PRKAR1AP10644 381 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 IL12BP29460 328 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 INPP1P49441 399 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 STARD6P59095 220 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 ARHGAP40Q5TG30 622 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 ZNF57Q68EA5 555 aaPredicted RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 TEX19Q8NA77 164 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 DMRTB1Q96MA1 342 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 OR14A2Q96R54 314 aa17.06■□□□□ 0.32
USP49-202ENST00000373010 MRTO4Q9UKD2 239 aaKnown RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 TNRC18O15417 2968 aaPredicted RBP17.06■□□□□ 0.32
USP49-202ENST00000373010 ARID1BQ8NFD5 2236 aaPredicted RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 HMX3A6NHT5 357 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 H7C1C5 153 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 BCAT2O15382 392 aaPredicted RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 LANCL1O43813 399 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 CPNE3O75131 537 aaKnown RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 LCN6P62502 163 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 MZT2BQ6NZ67 158 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 RPL22L1Q6P5R6 122 aaKnown RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 PLET1Q6UQ28 207 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 SHISA6Q6ZSJ9 500 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 OR5H6Q8NGV6 325 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 UBASH3BQ8TF42 649 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 LIPHQ8WWY8 451 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 TAAR8Q969N4 342 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 KCNJ15Q99712 375 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 LAT2Q9GZY6 243 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 HDHD2Q9H0R4 259 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 NLKQ9UBE8 527 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 NUFIP1Q9UHK0 495 aaKnown RBP17.05■□□□□ 0.32
USP49-202ENST00000373010 MKL2Q9ULH7 1088 aa17.05■□□□□ 0.32
USP49-202ENST00000373010 CLEC4AQ9UMR7 237 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms