RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CYB5BO43169 146 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 MTHFD2P13995 350 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR1E2P47887 323 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 KIAA1024LP59773 190 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 PLP2Q04941 152 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 GRB7Q14451 532 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 CATSPEREQ5SY80 951 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 ABHD17BQ5VST6 288 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 LRRTM1Q86UE6 522 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 WDR20Q8TBZ3 569 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 A6NL46 340 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 SUSD5O60279 629 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 F3P13726 295 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 RAB6CQ53S08 254 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 NLRC3Q7RTR2 1065 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 SLC38A6Q8IZM9 456 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 WWTR1Q9GZV5 400 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 RAB6CQ9H0N0 254 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 TAF1P21675 1872 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 KIR2DS5A0A0G2JLQ3 304 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 A0A0G2JNG1 304 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 KIR2DS3K7RE56 304 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 SCO2O43819 266 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 S1PR4O95977 384 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 ELK1P19419 428 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 UQCRC2P22695 453 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 RPL29P47914 159 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 SELENOVP59797 346 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 FAM189BP81408 668 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 GPR176Q14439 515 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 KIR2DS5Q14953 304 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 NSDHLQ15738 373 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 LHX8Q68G74 356 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 LRFN4Q6PJG9 635 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 SARDHQ9UL12 918 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 NQO2P16083 231 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 POU3F4P49335 361 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 WNT4P56705 351 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 HBG1P69891 147 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 HBG2P69892 147 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 MSMO1Q15800 293 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 HAGHQ16775 308 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 NOXRED1Q6NXP6 359 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 TOMM20LQ6UXN7 152 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 HAVCR2Q8TDQ0 301 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 SORCS2Q96PQ0 1159 aa13.12□□□□□ -0.31
RAPGEF1-202ENST00000372190 CEBPZOSA8MTT3 80 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HOXB5P09067 269 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 PTBP1P26599 531 aaKnown RBP eCLIP13.11□□□□□ -0.313e-7■■■■■ 35.6
RAPGEF1-202ENST00000372190 ARNTP27540 789 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 CLDN6P56747 220 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 FOXK1P85037 733 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 RBMS2Q15434 407 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 CDHR3Q6ZTQ4 885 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 RTN4RL1Q86UN2 441 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 MED18Q9BUE0 208 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 PISDQ9UG56 409 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 PAPPAQ13219 1627 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 GFRA2O00451 464 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 DVL1O14640 695 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TBX19O60806 448 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TIMP2P16035 220 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 NDUFV2P19404 249 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 SERPINA2P20848 420 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 CXADRP78310 365 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 MAT1AQ00266 395 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HTR4Q13639 388 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TMUB2Q71RG4 321 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ADAMTS14Q8WXS8 1223 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TMEM234Q8WY98 164 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HHATLQ9HCP6 504 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 LRIT1Q9P2V4 623 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 CSNK1EP49674 416 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 Q6ZNX1 250 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 KDF1Q8NAX2 398 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR4M1Q8NGD0 313 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 MSLNLQ96KJ4 702 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ING1Q9UK53 422 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ENTPD2Q9Y5L3 495 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 THSD7AQ9UPZ6 1657 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HPGDSO60760 199 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TNFSF8P32971 234 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZNF90Q03938 601 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 TESK1Q15569 626 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 HSD11B1LQ7Z5J1 315 aa13.11□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZNF573Q86YE8 665 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms