RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 UBL4AP11441 157 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 FUT1P19526 365 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 NOS3P29474 1203 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 SLC6A8P48029 635 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 MC2RQ01718 297 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 LGALS3BPQ08380 585 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 SLC22A16Q86VW1 577 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 BMPERQ8N8U9 685 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 OR4C3Q8NH37 302 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 OR51A7Q8NH64 312 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 LIPHQ8WWY8 451 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 DAZLQ92904 295 aaKnown RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 KIAA1143Q96AT1 154 aaPredicted RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 OTULINQ96BN8 352 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 ITPKCQ96DU7 683 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 GPX7Q96SL4 187 aaPredicted RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 TEAD3Q99594 435 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 ZNF768Q9H5H4 540 aaKnown RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 ZNF304Q9HCX3 659 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 TRIM36Q9NQ86 728 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 PNO1Q9NRX1 252 aaKnown RBP12.84□□□□□ -0.35
LDB3-204ENST00000372066 SRPK3Q9UPE1 567 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 CLCA3PQ9Y6N3 262 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 BOD1L1Q8NFC6 3051 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 ARPC3O15145 178 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 TO15178 435 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 OR7A10O76100 309 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 MT-ND5P03915 603 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 NGFRP08138 427 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 SBK2P0C263 348 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 IMPDH2P12268 514 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 PTNP21246 168 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 TNFSF8P32971 234 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 PSMD7P51665 324 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 PRPS1P60891 318 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 FABP5Q01469 135 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 ZNF791Q3KP31 576 aaPredicted RBP12.83□□□□□ -0.36
LDB3-204ENST00000372066 SLC35F1Q5T1Q4 408 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 STEAP3Q658P3 488 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 DPY19L2P2Q6ZN68 376 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 ARIH2OSQ8N7S6 290 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 OR1L3Q8NH93 324 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 ITFG2Q969R8 447 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 C3orf49Q96BT1 292 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 TMCO6Q96DC7 493 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
LDB3-204ENST00000372066 TNFRSF13CQ96RJ3 184 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 YIPF2Q9BWQ6 316 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 SPRY4Q9C004 299 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 BABAM2Q9NXR7 383 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 TUBD1Q9UJT1 453 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 ZNF229Q9UJW7 825 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 SLC6A5Q9Y345 797 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 NOX1Q9Y5S8 564 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 MAU2Q9Y6X3 613 aa12.83□□□□□ -0.36
LDB3-204ENST00000372066 TLN1Q9Y490 2541 aaKnown RBP12.83□□□□□ -0.36
LDB3-204ENST00000372066 LOC101059948A0A1B0GTJ6 334 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 A0A1W2PQD3 144 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ELOA3DA6NLF2 546 aaPredicted RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 CTDSP2O14595 271 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 RGS5O15539 181 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ZNF264O43296 627 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 RGS9O75916 674 aaPredicted RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 DDAH2O95865 285 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 APOA1P02647 267 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ALAS2P22557 587 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 SEPHS1P49903 392 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 RPS7P62081 194 aaKnown RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 HNRNPA0Q13151 305 aaKnown RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 SKP2Q13309 424 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 FHL1Q13642 323 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 CRMP1Q14194 572 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 GGTLC2Q14390 218 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 NNATQ16517 81 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ELOA3BQ3SY89 546 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 KLHL12Q53G59 568 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 SLC35D3Q5M8T2 416 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ZNF362Q5T0B9 420 aaPredicted RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 DDI2Q5TDH0 399 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 POC5Q8NA72 575 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ELOA3Q8NG57 546 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ZNF721Q8TF20 911 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 PTP4A1Q93096 173 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 NACC2Q96BF6 587 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ERMAPQ96PL5 475 aaPredicted RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 ZPBPQ9BS86 351 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ENKD1Q9H0I2 346 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 APMAPQ9HDC9 416 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 ZNF71Q9NQZ8 489 aaPredicted RBP12.82□□□□□ -0.36
LDB3-204ENST00000372066 PCDHGB7Q9Y5F8 929 aa12.82□□□□□ -0.36
LDB3-204ENST00000372066 C2orf92A0A1B0GVN3 265 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms