RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 HMGCLP35914 325 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CPOXP36551 454 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 UBE2IP63279 158 aaKnown RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SLC35A2P78381 396 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 FOXK1P85037 733 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A2Q5DJT8 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A1Q5HYN5 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OR6M1Q8NGM8 313 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CT45A3Q8NHU0 189 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 IER3IP1Q9Y5U9 82 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 A0A0A6YYJ9 748 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OXA1LQ15070 435 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 TREML2Q5T2D2 321 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 WDR5BQ86VZ2 330 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 IFI44Q8TCB0 444 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 PCDHB10Q9UN67 800 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF727A8MUV8 499 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SLC16A6O15403 523 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 GPRIN2O60269 458 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 TUSC2O75896 110 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 LAMP1P11279 417 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 ACVRL1P37023 503 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 ASAH1Q13510 395 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 UBXN2BQ14CS0 331 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 TSLPQ969D9 159 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 UTP4Q969X6 686 aaKnown RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SLC6A20Q9NP91 592 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CD1EP15812 388 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SIM1P81133 766 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 FGF4P08620 206 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 IAH1Q2TAA2 248 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 ZBTB37Q5TC79 503 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OPN5Q6U736 354 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SDR9C7Q8NEX9 313 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CREB3L4Q8TEY5 395 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM239Q8WW34 195 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 NOL4LQ96MY1 436 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 SLC12A9Q9BXP2 914 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 PARP12Q9H0J9 701 aaKnown RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 VSX1Q9NZR4 365 aaPredicted RBP14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OR9K2Q8NGE7 335 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OR10D4PQ8NGN7 298 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OR4F5Q8NH21 305 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 OR4F4Q96R69 305 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 CHRDQ9H2X0 955 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 RNF150Q9ULK6 438 aa14.28□□□□□ -0.12
COL5A1-201ENST00000371817 LTN1O94822 1766 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 TRABD2BA6NFA1 517 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 H3BQ06 376 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 DBHP09172 617 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 MTNR1BP49286 362 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 TCEAL1Q15170 157 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 ARNT2Q9HBZ2 717 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 MTCH1Q9NZJ7 389 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 LMTK2Q8IWU2 1503 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF860A6NHJ4 632 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 UNCXA6NJT0 531 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 SLC16A7O60669 478 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 SFTPDP35247 375 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 RFC3P40938 356 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 PLCXD3Q63HM9 321 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 DYRK2Q92630 601 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 GPR20Q99678 358 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 RBM24Q9BX46 236 aaKnown RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 PCED1AQ9H1Q7 454 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 ADAM29Q9UKF5 820 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF337Q9Y3M9 751 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 A3GALT2U3KPV4 340 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 SLC11A1P49279 550 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 STK19P49842 368 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 UBE2NP61088 152 aaKnown RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 EXOSC2Q13868 293 aaKnown RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 PTPRCAPQ14761 206 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 HENMT1Q5T8I9 393 aaKnown RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM71Q6P5X7 295 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 TOMM20LQ6UXN7 152 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 FGGYQ96C11 551 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 SOX7Q9BT81 388 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM59Q9BXS4 323 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 POLMQ9NP87 494 aaPredicted RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 OLAHQ9NV23 265 aa14.27□□□□□ -0.12
COL5A1-201ENST00000371817 STRAPQ9Y3F4 350 aaKnown RBP14.27□□□□□ -0.12
COL5A1-201ENST00000371817 BET1O15155 118 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 GM2AP17900 193 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 GGNBP1Q5YKI7 109 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 ASB13Q8WXK3 278 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 TVP23CQ96ET8 276 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 PEBP4Q96S96 227 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 ZNF516Q92618 1163 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 DOCK8Q8NF50 2099 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 C10orf71Q711Q0 1435 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 TBX18O95935 607 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 MGMTP16455 207 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 COMMD6Q7Z4G1 85 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 OR4D10Q8NGI6 311 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 OR1J1Q8NGS3 322 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 UBXN10Q96LJ8 280 aa14.27□□□□□ -0.13
COL5A1-201ENST00000371817 G3V2L1 256 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms