RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DLX5P56178 289 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 PEA15Q15121 130 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF546Q86UE3 836 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 RNF113BQ8IZP6 322 aaKnown RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 RPL3LQ92901 407 aaKnown RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 ELF4Q99607 663 aaPredicted RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC6A17Q9H1V8 727 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 CALHM2Q9HA72 323 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 H3BNC9 293 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 ITPKCQ96DU7 683 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 TUBG2Q9NRH3 451 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 GPR160Q9UJ42 338 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 GPR137BO60478 399 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 UTS2O95399 124 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 MBOAT2Q6ZWT7 520 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 LSMEM2Q8N112 164 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF808Q8N4W9 903 aaPredicted RBP20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 MUL1Q969V5 352 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 DCBLD2Q96PD2 775 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 ARHGAP33O14559 1287 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 COX20Q5RI15 118 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 AGBL5Q8NDL9 886 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 NMNAT3Q96T66 252 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 FAM234AQ9H0X4 552 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 CXCL16Q9H2A7 254 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 NOX4Q9NPH5 578 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 FBXO7Q9Y3I1 522 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 FURINP09958 794 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 MAKP20794 623 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 GABRA5P31644 462 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 YPEL5P62699 121 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 HACD4Q5VWC8 232 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 NPSR1Q6W5P4 371 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 OSGIN1Q9UJX0 560 aa20.56■□□□□ 0.88
TM9SF3-201ENST00000371142 ENSAO43768 121 aaKnown RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 TUSC2O75896 110 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF582Q96NG8 517 aaPredicted RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 UTP23Q9BRU9 249 aaKnown RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 CXorf36Q9H7Y0 433 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 SIDT1Q9NXL6 827 aaKnown RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 DCDP81605 110 aaKnown RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 RBPJQ06330 500 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 RAB39BQ96DA2 213 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC22A12Q96S37 553 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 COPS3Q9UNS2 423 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 HS3ST2Q9Y278 367 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 BIDP55957 195 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 PAN3Q58A45 887 aaKnown RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 MED25Q71SY5 747 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 UBXN10Q96LJ8 280 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 CTRCQ99895 268 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 CDK4P11802 303 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 RETREG3Q86VR2 466 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 LINC00346Q8IVM7 164 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF740Q8NDX6 193 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 TMEM255BQ8WV15 326 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 HSFX1Q9UBD0 423 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 CHRNB4P30926 498 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 CST9LP1Q5W188 147 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 SLCO4C1Q6ZQN7 724 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 ANKRD19PQ9H560 264 aa20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.55■□□□□ 0.88
TM9SF3-201ENST00000371142 CLDN24A6NM45 220 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC5A2P31639 672 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 POLR2IP36954 125 aaKnown RBP20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 SIRPAP78324 504 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 REEP5Q00765 189 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 GNG13Q9P2W3 67 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 TMED7-TICAM2A0A0A6YYA0 188 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 TMEM212A6NML5 194 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 KITLGP21583 273 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 TSFMP43897 325 aaKnown RBP20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 LINC00696Q6ZRV3 163 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 KANSL1Q7Z3B3 1105 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 LAX1Q8IWV1 398 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 SGPP1Q9BX95 441 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 WWTR1Q9GZV5 400 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 TMED7Q9Y3B3 224 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 C7orf72A4D263 438 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 UBBP0CG47 229 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 UBCP0CG48 685 aaKnown RBP20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 OMGP23515 440 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 MSMO1Q15800 293 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 LGALS14Q8TCE9 139 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 HLA-CQ95604 372 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 TM7SF3Q9NS93 570 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 HEMK1Q9Y5R4 338 aaPredicted RBP20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 ICAM2P13598 275 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC1A3P43003 542 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 SLAMF7Q9NQ25 335 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 MYO10Q9HD67 2058 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 KCTD11Q693B1 232 aa20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 METTL17Q9H7H0 456 aaPredicted RBP20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 RANGRFQ9HD47 186 aaPredicted RBP20.54■□□□□ 0.88
TM9SF3-201ENST00000371142 A0A1B0GVG6 124 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 RFXAPO00287 272 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 HTR2CP28335 458 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 HSD17B7P56937 341 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 GPR176Q14439 515 aa20.53■□□□□ 0.88
TM9SF3-201ENST00000371142 BCDIN3DQ7Z5W3 292 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms