RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MAGEA5P43359 124 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 DNASE1L1P49184 302 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 HMGA2P52926 109 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 SLC37A1P57057 533 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 PPP3R1P63098 170 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 HMGCS1Q01581 520 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 PLGLB1Q02325 96 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 LARS2Q15031 903 aaKnown RBP13.54□□□□□ -0.24
LMO4-201ENST00000370542 MED22Q15528 200 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 SLC22A10Q63ZE4 541 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 MEX3BQ6ZN04 569 aaKnown RBP13.54□□□□□ -0.24
LMO4-201ENST00000370542 PTOV1Q86YD1 416 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 C19orf18Q8NEA5 215 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 SLC22A8Q8TCC7 542 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 SPACA9Q96E40 222 aaPredicted RBP13.54□□□□□ -0.24
LMO4-201ENST00000370542 TMEM80Q96HE8 168 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 DMRTB1Q96MA1 342 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 FEVQ99581 238 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 RPL36Q9Y3U8 105 aaKnown RBP13.54□□□□□ -0.24
LMO4-201ENST00000370542 FAM215AQ9Y5M1 114 aa13.54□□□□□ -0.24
LMO4-201ENST00000370542 CHCHD2Q9Y6H1 151 aaPredicted RBP13.54□□□□□ -0.24
LMO4-201ENST00000370542 NINQ8N4C6 2090 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 LINC00862A6NCI5 91 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 FABP12A6NFH5 140 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 WASHC1A8K0Z3 465 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 G3V3Y1 287 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 BET1O15155 118 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 PRKRAO75569 313 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 HOXD4P09016 255 aaPredicted RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 SLC35E2P0CK97 266 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 CD99P14209 185 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 DRD2P14416 443 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 PRKACBP22694 351 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 MAP2K3P46734 347 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 IDH2P48735 452 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 BTG1P62324 171 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 TAGLNQ01995 201 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 PMPCAQ10713 525 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 BAMBIQ13145 260 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 RIN1Q13671 783 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 DDX39BQ13838 428 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 EFR3AQ14156 821 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 SLC10A1Q14973 349 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 EBPQ15125 230 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 NTRK2Q16620 822 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 CPSF6Q16630 551 aaKnown RBP eCLIP13.53□□□□□ -0.24
LMO4-201ENST00000370542 CAMKMTQ7Z624 323 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 DMRTC2Q8IXT2 367 aaPredicted RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 LRRC25Q8N386 305 aaPredicted RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 NEDD4LQ96PU5 975 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 ACPTQ9BZG2 426 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 ZNF703Q9H7S9 590 aaPredicted RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 ANKRA2Q9H9E1 313 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 RANGRFQ9HD47 186 aaPredicted RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 ACKR4Q9NPB9 350 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 NDUFB11Q9NX14 153 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 SIRT5Q9NXA8 310 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 CNIH4Q9P003 139 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 AASSQ9UDR5 926 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 NUFIP1Q9UHK0 495 aaKnown RBP13.53□□□□□ -0.24
LMO4-201ENST00000370542 SPEF1Q9Y4P9 236 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 SNX8Q9Y5X2 465 aa13.53□□□□□ -0.24
LMO4-201ENST00000370542 LRRC3CA6NJW4 275 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 FIGNL2A6NMB9 653 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 ZAR1LA6NP61 321 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 SCN2BO60939 215 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 WDR1O75083 606 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 GPX5O75715 221 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 CELA3AP09093 270 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 GLI4P10075 376 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 SDC1P18827 310 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 EPHA2P29317 976 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 SLC9A3P48764 834 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 TLE4Q04727 773 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 FUT7Q11130 342 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 ZNF79Q15937 498 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 HSD17B12Q53GQ0 312 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 TRIQKQ629K1 86 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 ZNF621Q6ZSS3 439 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 PTCHD4Q6ZW05 846 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 LSMEM1Q8N8F7 131 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 OR5H6Q8NGV6 325 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 GPR151Q8TDV0 419 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 GEMIN6Q8WXD5 167 aaKnown RBP13.52□□□□□ -0.25
LMO4-201ENST00000370542 RIT1Q92963 219 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 SNAPC3Q92966 411 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 SLC25A46Q96AG3 418 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 SARAFQ96BY9 339 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 OPALINQ96PE5 141 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 CNPPD1Q9BV87 410 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 REPIN1Q9BWE0 567 aaKnown RBP13.52□□□□□ -0.25
LMO4-201ENST00000370542 UCK2Q9BZX2 261 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 WWTR1Q9GZV5 400 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 TPT1P8Q9HAU6 139 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms