RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TEX29Q8N6K0 151 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMEM99Q8N816 258 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 FAM169BQ8N8A8 192 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR9K2Q8NGE7 335 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 CLHC1Q8NHS4 586 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 SLC25A43Q8WUT9 341 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 GTF3AQ92664 365 aaKnown RBP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 STACQ99469 402 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 SSBP4Q9BWG4 385 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 HOXD1Q9GZZ0 328 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 MRPL18Q9H0U6 180 aaKnown RBP7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 SERHL2Q9H4I8 314 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 SERINC1Q9NRX5 453 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 PARPBPQ9NWS1 579 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 MID2Q9UJV3 735 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 TMCO1Q9UM00 188 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 HDGFL3Q9Y3E1 203 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 CMAHPQ9Y471 501 aa7.22□□□□□ -1.25
HMGB1P39-201ENST00000366304 LOC100653049A0A140TA62 436 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMEM72A0PK05 275 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 AP3D1O14617 1153 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 PIP5K1BO14986 540 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 PIN1P1O15428 100 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 UGT2B17O75795 530 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 KRT34O76011 436 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 SUPT7LO94864 414 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 HSPA4LO95757 839 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 PCGF2P35227 344 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 PGM1P36871 562 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 APOBEC1P41238 236 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 MAGEA4P43358 317 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 EVX1P49640 407 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 GTF2A1P52655 376 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 UBE2NP61088 152 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 RPS26P62854 115 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 MRPS11P82912 194 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ARF1P84077 181 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 NPRL3Q12980 569 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 NAB1Q13506 487 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 PDE7AQ13946 482 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF141Q15928 474 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 UAP1Q16222 522 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 EMBQ6PCB8 327 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZCCHC12Q6PEW1 402 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 RBMS3Q6XE24 437 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 SPATC1Q76KD6 591 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 WDFY1Q8IWB7 410 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 FAM71CQ8NEG0 241 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 OR5D16Q8NGK9 328 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 MAGEE2Q8TD90 523 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 SLC25A28Q96A46 364 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZHX1-C8orf76Q96EF9 292 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 KTI12Q96EK9 354 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 CHMP6Q96FZ7 201 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF75AQ96N20 296 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 TSPAN32Q96QS1 320 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 SDF2Q99470 211 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 MRPL57Q9BQC6 102 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 MRPL46Q9H2W6 279 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 AKTIPQ9H8T0 292 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZMAT3Q9HA38 289 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZCCHC3Q9NUD5 404 aaKnown RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 TMEM181Q9P2C4 612 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 BAIAP2L1Q9UHR4 511 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 LEF1Q9UJU2 399 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 NUP50Q9UKX7 468 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 NFU1Q9UMS0 254 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 TRAPPC4Q9Y296 219 aa7.21□□□□□ -1.26
HMGB1P39-201ENST00000366304 IGHV3OR16-10A0A075B7F0 116 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 CLDN24A6NM45 220 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF587BE7ETH6 402 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 TRAPPC2LH3BP13 241 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 M0QZ24 198 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 TBX19O60806 448 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 SEC14L2O76054 403 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 AKR7A3O95154 331 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 GPANK1O95872 356 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 CSTAP01040 98 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 KNG1P01042 644 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZNF35P13682 527 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ANPEPP15144 967 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 SELEP16581 610 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 SDC1P18827 310 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 STX2P32856 288 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 RYKP34925 604 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 SLC35A1P78382 337 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 FXNQ16595 210 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 KPRPQ5T749 579 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 PAQR6Q6TCH4 344 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 ZDHHC24Q6UX98 284 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 EPHX4Q8IUS5 362 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 OR2T11Q8NH01 316 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 KIF18AQ8NI77 898 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 FAM76AQ8TAV0 307 aa7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 FAM110DQ8TAY7 271 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P39-201ENST00000366304 FBXO25Q8TCJ0 367 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms