RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 KCTD11Q693B1 232 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 IGDCC3Q8IVU1 814 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 B4GALT6Q9UBX8 382 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM72A0PK05 275 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 M0R3H8 397 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 PIN1Q13526 163 aaPredicted RBP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 ADGRE4PQ86SQ3 457 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 PRR22Q8IZ63 422 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 KIRREL1Q96J84 757 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SRRQ9GZT4 340 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 PLK3Q9H4B4 646 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SUSD2Q9UGT4 822 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 NRP1O14786 923 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 FABP7O15540 132 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 CD63P08962 238 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 HTR4Q13639 388 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 DCAF16Q9NXF7 216 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 DDAH2O95865 285 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 F10P00742 488 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SCG5P05408 212 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 OLIG2Q13516 323 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 CYS1Q717R9 158 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 F2RL3Q96RI0 385 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 GAREM1Q9H706 876 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 ZDHHC11Q9H8X9 412 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 DICER1Q9UPY3 1922 aaKnown RBP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 WNT7AO00755 349 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TNFSF8P32971 234 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 CDK5Q00535 292 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 RETREG3Q86VR2 466 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SECTM1Q8WVN6 248 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 ASB13Q8WXK3 278 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SFXN2Q96NB2 322 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 MROH1Q8NDA8 1641 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TAAR5O14804 337 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TNFRSF1BP20333 461 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 PTBP1P26599 531 aaKnown RBP eCLIP8.69□□□□□ -1.023e-7■■■■■ 27.3
VPS13A-203ENST00000360280 CEACAM7Q14002 265 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 STK11Q15831 433 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 AMTP48728 403 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TXNRD3NBQ6F5E7 133 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 NPSR1Q6W5P4 371 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 CACNG4Q9UBN1 327 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 MED16Q9Y2X0 877 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TCRBV21S2A2A0A5A6 115 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 PDGFAP04085 211 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OR4D1Q15615 310 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 VASNQ6EMK4 673 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 ESPNLQ6ZVH7 1005 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 GGHQ92820 318 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 MRGPRX2Q96LB1 330 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 ERVMER34-1Q9H9K5 563 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 NRIP3Q9NQ35 241 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 FTSJ1Q9UET6 329 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RARRES3Q9UL19 164 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 VDAC3Q9Y277 283 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 LRRC30A6NM36 301 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OTX2P32243 289 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 DCTP40126 519 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OPRD1P41143 372 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 FOLR3P41439 243 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF718Q3SXZ3 478 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 LBX2Q6XYB7 198 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 GPR26Q8NDV2 337 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 INSL5Q9Y5Q6 135 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SLC6A18Q96N87 628 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 APOBEC3BQ9UH17 382 aaKnown RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 V9GYS6 101 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RIMBP3CA6NJZ7 1639 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RIMBP3BA6NNM3 1639 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RIMBP3Q9UFD9 1639 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 ZFC3H1O60293 1989 aaKnown RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SLC43A1O75387 559 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 XCR1P46094 333 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RPL11P62913 178 aaKnown RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 IKZF1Q13422 519 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TCEAL1Q15170 157 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SLAMF7Q9NQ25 335 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 FCRLAQ7L513 359 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 STT3BQ8TCJ2 826 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 APH1AQ96BI3 265 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TECTBQ96PL2 329 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 C20orf24Q9BUV8 137 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SLC6A20Q9NP91 592 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 CLDND1Q9NY35 253 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SMPD1P17405 629 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 PDZD11Q5EBL8 140 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 HMGN2P46Q86SG4 172 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OR11L1Q8NGX0 322 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 NPY6RQ99463 290 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 INPP5KQ9BT40 448 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 ARL2-SNX15V9GYD0 113 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 HTR2CP28335 458 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 CPZQ66K79 652 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 B3GNT8Q7Z7M8 397 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SDR39U1Q9NRG7 319 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms