RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ATPAF1Q5TC12 328 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-202ENST00000359082 OGFOD3Q6PK18 319 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 OR5D18Q8NGL1 313 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 RANGRFQ9HD47 186 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-202ENST00000359082 GPR75O95800 540 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 SLC2A1P11166 492 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 INHBCP55103 352 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 H1FXQ92522 213 aaKnown RBP17.09■□□□□ 0.33
SHANK1-202ENST00000359082 UHRF2Q96PU4 802 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 C1orf123Q9NWV4 160 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 WASH4PA8MWX3 477 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 ARNTLO00327 626 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 OPRD1P41143 372 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 TATDN3Q17R31 274 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 CLVS2Q5SYC1 327 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 OR14A16Q8NHC5 309 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 TWSG1Q9GZX9 223 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 ANKRD19PQ9H560 264 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 USP22Q9UPT9 525 aa17.09■□□□□ 0.33
SHANK1-202ENST00000359082 COL2A1P02458 1487 aaPredicted RBP17.08■□□□□ 0.33
SHANK1-202ENST00000359082 MCRIP1C9JLW8 97 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 ILKQ13418 452 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 OPN5Q6U736 354 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 GNB4Q9HAV0 340 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 SLAMF8Q9P0V8 285 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 SIRPAP78324 504 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 GPR176Q14439 515 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 DCAF12Q5T6F0 453 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 SLC39A11Q8N1S5 342 aa17.08■□□□□ 0.33
SHANK1-202ENST00000359082 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 PRKRAO75569 313 aaKnown RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 FAPQ12884 760 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 LTB4RQ15722 352 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 WDR83Q9BRX9 315 aaKnown RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 KATNB1Q9BVA0 655 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 METTL17Q9H7H0 456 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 LRP6O75581 1613 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 TCRBV3S1A0A5B6 114 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 SIGLEC6O43699 453 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 SCAF4O95104 1147 aaKnown RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 PMP2P02689 132 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 CD63P08962 238 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 VEGFBP49765 207 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 SSR4P51571 173 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 CDONQ4KMG0 1287 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 S100A7AQ86SG5 101 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF597Q96LX8 424 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 SLC22A7Q9Y694 548 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 NAV1Q8NEY1 1877 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM82A0PJX8 343 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 RAB40ALP0C0E4 278 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 T-ENOLP0DO92 83 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 FBXO46Q6PJ61 603 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 PRICKLE2Q7Z3G6 844 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 RAB40AQ8WXH6 277 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 ATOH1Q92858 354 aaPredicted RBP17.08■□□□□ 0.32
SHANK1-202ENST00000359082 SELENOIQ9C0D9 397 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 MYH7P12883 1935 aa17.08■□□□□ 0.32
SHANK1-202ENST00000359082 SERPINF1P36955 418 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 RGRP47804 291 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 CATR1Q13166 79 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM31Q5JXX7 168 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 B3GLCTQ6Y288 498 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 ASB11Q8WXH4 323 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 RAB3CQ96E17 227 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 C1orf198Q9H425 327 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 NOX4Q9NPH5 578 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 OSGIN1Q9UJX0 560 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 MRPS28Q9Y2Q9 187 aaKnown RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 ALDOCP09972 364 aaKnown RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 SLC5A12Q1EHB4 618 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 IDO2Q6ZQW0 420 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 CMIPQ8IY22 773 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 MYOTQ9UBF9 498 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 PCYT1BQ9Y5K3 369 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 EIF4EP06730 217 aaKnown RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF74Q16587 644 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 ALKAL2Q6UX46 152 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 AAED1Q7RTV5 226 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 MKRN2Q9H000 416 aaKnown RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 BCAT2O15382 392 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 DCAF7P61962 342 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 STT3BQ8TCJ2 826 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 LINC01599Q8WXQ3 324 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 ARPC5LQ9BPX5 153 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 TCEAL7Q9BRU2 100 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM72A0PK05 275 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 OR7A17O14581 309 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 GALR3O60755 368 aaPredicted RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 GABRB3P28472 473 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 DLX5P56178 289 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 FAM213BQ8TBF2 198 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 TSSK2Q96PF2 358 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 UTP23Q9BRU9 249 aaKnown RBP17.07■□□□□ 0.32
SHANK1-202ENST00000359082 LIN7BQ9HAP6 207 aa17.07■□□□□ 0.32
SHANK1-202ENST00000359082 LHX3Q9UBR4 397 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms