RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PTGER4P35408 488 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 CA7P43166 264 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 P2RY4P51582 365 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 SLC34A1Q06495 639 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 GK3PQ14409 553 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 NSUN5P2Q63ZY6 315 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 SHQ1Q6PI26 577 aaKnown RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 B3GNT6Q6ZMB0 384 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 TMPRSS11FQ6ZWK6 438 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 FCRLAQ7L513 359 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 MAMDC2Q7Z304 686 aaPredicted RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 CDK20Q8IZL9 346 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 KDM8Q8N371 416 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 GIPC3Q8TF64 312 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ABHD3Q8WU67 409 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 LIPHQ8WWY8 451 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 TACO1Q9BSH4 297 aaKnown RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 C6orf203Q9P0P8 240 aaPredicted RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 KLHL13Q9P2N7 655 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ZNF229Q9UJW7 825 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 CORINQ9Y5Q5 1042 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 KIAA1549Q9HCM3 1950 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 EFCAB9A8MZ26 197 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 POU2F1P14859 743 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ZNF23P17027 643 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 CASP6P55212 293 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 NUP107P57740 925 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 MFSD13AQ14CX5 517 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 SF3B4Q15427 424 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 OTUD3Q5T2D3 398 aaPredicted RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 C1orf94Q6P1W5 598 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 NCCRP1Q6ZVX7 275 aaPredicted RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ATCAYQ86WG3 371 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 C9orf106Q8NAJ2 232 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 AQP11Q8NBQ7 271 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ICA1LQ8NDH6 482 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 OR5K1Q8NHB7 308 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 PRR7Q8TB68 274 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 RNF128Q8TEB7 428 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ZHX1-C8orf76Q96EF9 292 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 FEVQ99581 238 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 TTYH2Q9BSA4 534 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 PRRG4Q9BZD6 226 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 CALHM2Q9HA72 323 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 KRCC1Q9NPI7 259 aaPredicted RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 MRPL39Q9NYK5 338 aaKnown RBP13.28□□□□□ -0.28
CCNE1-202ENST00000357943 OAZ3Q9UMX2 235 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 ZNF175Q9Y473 711 aa13.28□□□□□ -0.28
CCNE1-202ENST00000357943 HTR3EA5X5Y0 456 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 AQP7P3A6NL99 342 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 G3V2T6 193 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 PYCARD-AS1I3L0S3 204 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 KLF4O43474 513 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 TOXO94900 526 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 HOXD4P09016 255 aaPredicted RBP13.27□□□□□ -0.29
CCNE1-202ENST00000357943 IFNGR2P38484 337 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 ARHGDIAP52565 204 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 ANKRD34AQ69YU3 496 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 H1FNTQ75WM6 255 aaPredicted RBP13.27□□□□□ -0.29
CCNE1-202ENST00000357943 P4HA3Q7Z4N8 544 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 MARVELD2Q8N4S9 558 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 LINC00471Q8N535 108 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 SCAIQ8N9R8 606 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 OR13C2Q8NGS9 318 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 WNT2BQ93097 391 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 GTPBP3Q969Y2 492 aaKnown RBP13.27□□□□□ -0.29
CCNE1-202ENST00000357943 NRBF2Q96F24 287 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 NIPSNAP1Q9BPW8 284 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 NAA11Q9BSU3 229 aaPredicted RBP13.27□□□□□ -0.29
CCNE1-202ENST00000357943 ASPNQ9BXN1 380 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 RNF122Q9H9V4 155 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 CHST11Q9NPF2 352 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 B3GALT5Q9Y2C3 310 aa13.27□□□□□ -0.29
CCNE1-202ENST00000357943 TRAV27A0A087WT01 109 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MBD3L4A6NDZ8 208 aaPredicted RBP13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MBD3L3A6NE82 208 aaPredicted RBP13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MBD3L5A6NJ08 208 aaPredicted RBP13.26□□□□□ -0.29
CCNE1-202ENST00000357943 SAC3D1A6NKF1 404 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MS4A18H0YCH9 400 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 BLOC1S5-TXNDC5H3BN57 136 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 PDLIM1O00151 329 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 PLPP3O14495 311 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 CYTIPO60759 359 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 PMS2P3Q13401 168 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 FHL1Q13642 323 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MS4A18Q3C1V0 323 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 TMEM225Q6GV28 225 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 ABLIM2Q6H8Q1 611 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 OAFQ86UD1 273 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 GPAT4Q86UL3 456 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 ZDHHC13Q8IUH4 622 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 EPHX4Q8IUS5 362 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 GCNT2Q8N0V5 402 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 OR51A7Q8NH64 312 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MBD3L2Q8NHZ7 208 aaPredicted RBP13.26□□□□□ -0.29
CCNE1-202ENST00000357943 PSD2Q9BQI7 771 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 TAS2R5Q9NYW4 299 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms