RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RPRMLQ8N4K4 120 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 LINC00471Q8N535 108 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 ATG16L2Q8NAA4 619 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 ST6GALNAC3Q8NDV1 305 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 FNDC9Q8TBE3 224 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 LIPHQ8WWY8 451 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 TNFRSF13CQ96RJ3 184 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 DGCR6LQ9BY27 220 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 ZNF229Q9UJW7 825 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 MGAT4BQ9UQ53 548 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 EI24O14681 340 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 TGM6O95932 706 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 IFNGR2P38484 337 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 FXYD6P3P58550 94 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 PPP2R2BQ00005 443 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 TLE1Q04724 770 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 TSPAN31Q12999 210 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 MRPL49Q13405 166 aaKnown RBP22.69■■□□□ 1.22
SSBP3-202ENST00000357475 PDSS1Q5T2R2 415 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 RTL6Q6ICC9 239 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 KLHL17Q6TDP4 642 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 ADGRE4PQ86SQ3 457 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 KIF18BQ86Y91 864 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 MOSPD2Q8NHP6 518 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 EME1Q96AY2 570 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 TRIB1Q96RU8 372 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 ENKD1Q9H0I2 346 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 KRCC1Q9NPI7 259 aaPredicted RBP22.69■■□□□ 1.22
SSBP3-202ENST00000357475 KLHL13Q9P2N7 655 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 TMEFF2Q9UIK5 374 aaPredicted RBP22.69■■□□□ 1.22
SSBP3-202ENST00000357475 TINAGQ9UJW2 476 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 ARHGAP21Q5T5U3 1957 aa22.69■■□□□ 1.22
SSBP3-202ENST00000357475 RELNP78509 3460 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 NBASA2RRP1 2371 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 UNC119BA6NIH7 251 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 B8ZZF3 427 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 CASQ2O14958 399 aaPredicted RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 AQP8O94778 261 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 HPRP00739 348 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 TP53P04637 393 aaPredicted RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 GTF2E2P29084 291 aaKnown RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 AGFG1P52594 562 aaKnown RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 ACSF3Q4G176 576 aaPredicted RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 PAQR6Q6TCH4 344 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 RPTNQ6XPR3 784 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 GALNT5Q7Z7M9 940 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 OAFQ86UD1 273 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 DOLPP1Q86YN1 238 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 OR5J2Q8NH18 312 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 ZPLD1Q8TCW7 415 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 CPNE4Q96A23 557 aaPredicted RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 OSBPL10Q9BXB5 764 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 MCCC2Q9HCC0 563 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 CHST11Q9NPF2 352 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 MRPL39Q9NYK5 338 aaKnown RBP22.68■■□□□ 1.22
SSBP3-202ENST00000357475 TAS2R5Q9NYW4 299 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 IL20RAQ9UHF4 553 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 MED12LQ86YW9 2145 aa22.68■■□□□ 1.22
SSBP3-202ENST00000357475 MS4A18H0YCH9 400 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 PLPP3O14495 311 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 PTP4A3O75365 173 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 ADAP00813 363 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 NUP107P57740 925 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 RPS4XP62701 263 aaKnown RBP22.67■■□□□ 1.22
SSBP3-202ENST00000357475 PMS2P3Q13401 168 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 IGFBP7Q16270 282 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 MS4A18Q3C1V0 323 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 CHMP1BQ7LBR1 199 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 SDCCAG3Q96C92 435 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 ASPNQ9BXN1 380 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 EGLN3Q9H6Z9 239 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 KIF17Q9P2E2 1029 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 CLCF1Q9UBD9 225 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 REV1Q9UBZ9 1251 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 SH3BGRL2Q9UJC5 107 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 SIGLEC7Q9Y286 467 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 FAM215AQ9Y5M1 114 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 AQP7P3A6NL99 342 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 BLOC1S5-TXNDC5H3BN57 136 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 SOX14O95416 240 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 ANXA8P13928 327 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 UQCRC1P31930 480 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 AQP2P41181 271 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 DAG1Q14118 895 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 OGFRL1Q5TC84 451 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-202ENST00000357475 KDM4DQ6B0I6 523 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 THSD4Q6ZMP0 1018 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 Q6ZPB1 254 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-202ENST00000357475 ZBTB49Q6ZSB9 765 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 H1FNTQ75WM6 255 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-202ENST00000357475 NANOGNBQ7Z5D8 188 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 MAGEE2Q8TD90 523 aaPredicted RBP22.67■■□□□ 1.22
SSBP3-202ENST00000357475 ABHD3Q8WU67 409 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 C9orf16Q9BUW7 83 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 UCK2Q9BZX2 261 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 TIGARQ9NQ88 270 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 CORINQ9Y5Q5 1042 aa22.67■■□□□ 1.22
SSBP3-202ENST00000357475 RP1L1Q8IWN7 2480 aaPredicted RBP22.66■■□□□ 1.22
SSBP3-202ENST00000357475 DOCK7Q96N67 2140 aa22.66■■□□□ 1.22
SSBP3-202ENST00000357475 HTR3EA5X5Y0 456 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms