RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SPEGQ15772 3267 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR6C68A6NDL8 312 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ANKRD61A6NGH8 418 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CACNB4O00305 520 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PEX12O00623 359 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 VEGFDO43915 354 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CLEC3AO75596 197 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GABRA1P14867 456 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 EIF2S3P41091 472 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 FOXK2Q01167 660 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CHAF1BQ13112 559 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PON3Q15166 354 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ANKRD39Q53RE8 183 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TEX30Q5JUR7 227 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR7E24Q6IFN5 339 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZC3H14Q6PJT7 736 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LRRN1Q6UXK5 716 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 WDR88Q6ZMY6 472 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MRGPREQ86SM8 312 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 DMRTC2Q8IXT2 367 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PUSL1Q8N0Z8 303 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAM98AQ8NCA5 519 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 DMBX1Q8NFW5 382 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR7G2Q8NG99 324 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR2A1Q8NGT9 310 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMEM239Q8WW34 195 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LRIG1Q96JA1 1093 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 HS6ST2Q96MM7 605 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 INSM2Q96T92 566 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PCBD2Q9H0N5 130 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MARK1Q9P0L2 795 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MGAT4CQ9UBM8 478 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TBC1D3BA6NDS4 549 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAM171A2A8MVW0 826 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 SYT5O00445 386 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 FKTNO75072 461 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 UBL3O95164 117 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ADH5P11766 374 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 PPP3CBP16298 524 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 RNF4P78317 190 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 CDK3Q00526 305 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 MAPK14Q16539 360 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACER2Q5QJU3 275 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ELP2Q6IA86 826 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAM109BQ6ICB4 259 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 SLC48A1Q6P1K1 146 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ABHD17CQ6PCB6 329 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF836Q6ZNA1 936 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 Q6ZTK2 550 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 RANBP3LQ86VV4 465 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 SDR9C7Q8NEX9 313 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR6K6Q8NGW6 343 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR4K13Q8NH42 304 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 BPIFA2Q96DR5 249 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 UBL7Q96S82 380 aaPredicted RBP7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 TIMP4Q99727 224 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 MAP3K3Q99759 626 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARHGDIGQ99819 225 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 GPR174Q9BXC1 333 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACTRT3Q9BYD9 372 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 FBXO34Q9NWN3 711 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 CALML5Q9NZT1 146 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 KLK11Q9UBX7 282 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZMIZ1Q9ULJ6 1067 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 TRBV2A0A0J9YWF9 115 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 LOC390937A0A1W2PQ73 354 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 TSPAN11A1L157 253 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACOD1A6NK06 481 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 SLC22A31A6NKX4 558 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 RHPN2P1A8MT19 583 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARPC5O15511 151 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 TBX19O60806 448 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 SBK2P0C263 348 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 F3P13726 295 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 UGT2B7P16662 529 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 RAG2P55895 527 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 HSD17B7P56937 341 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 PITPNAQ00169 270 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 DHODHQ02127 395 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 DUSP5Q16690 384 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 GXYLT1Q4G148 440 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 DEFB134Q4QY38 66 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 MRPL2Q5T653 305 aaKnown RBP7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 METRNLQ641Q3 311 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 C3orf33Q6P1S2 294 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF613Q6PF04 617 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 GSG1LQ6UXU4 331 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 FRRS1Q6ZNA5 592 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMUB2Q71RG4 321 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 RD3Q7Z3Z2 195 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 SHISA5Q8N114 240 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR4E2Q8NGC2 313 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR52E2Q8NGJ4 325 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR10K1Q8NGX5 313 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 KCTD12Q96CX2 325 aaKnown RBP7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 OTUB2Q96DC9 234 aa7.59□□□□□ -1.19
CDC42SE1-201ENST00000357235 LINC00615Q96LM1 132 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms