RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 LIMS4P0CW20 117 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 NPIPA8P0DM63 369 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 EDN3P14138 238 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 GDNFP39905 211 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 FRKP42685 505 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 STXBP1P61764 594 aaKnown RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 RPP30P78346 268 aaKnown RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 SMAD4Q13485 552 aaKnown RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 EIF2S3LQ2VIR3 472 aaKnown RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 KRBOX4Q5JUW0 171 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 NCMAPQ5T1S8 102 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ZNF660Q6AZW8 331 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 C1orf94Q6P1W5 598 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ABHD17CQ6PCB6 329 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR51G2Q8NGK0 314 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR5M3Q8NGP4 307 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ADAMTS15Q8TE58 950 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 TMEM255BQ8WV15 326 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 MCHR1Q99705 422 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 LMAN2LQ9H0V9 348 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SLC38A1Q9H2H9 487 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 APOBEC3BQ9UH17 382 aaKnown RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 CA5BQ9Y2D0 317 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PLSCR5A0PG75 271 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 GRXCR1A8MXD5 290 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 AGPAT2O15120 278 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 CDC123O75794 336 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 SMIM6P0DI80 62 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ACP2P11117 423 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PDX1P52945 283 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 CDK5Q00535 292 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SGCGQ13326 291 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 TMEM255AQ5JRV8 349 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 APOOLQ6UXV4 268 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ADAMTSL4Q6UY14 1074 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 LRRTM1Q86UE6 522 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SMAP2Q8WU79 429 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 C14orf79Q96F83 325 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SUCNR1Q9BXA5 334 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR51M1Q9H341 326 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PRDM7Q9NQW5 492 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 C2orf42Q9NWW7 574 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 TESQ9UGI8 421 aaKnown RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 NDOR1Q9UHB4 597 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 CENPVL1A0A0U1RR11 272 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 LINC01553A4QN01 128 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 CREBL2O60519 120 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 SOX30O94993 753 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 KAT7O95251 611 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 GKN3PP0CG01 181 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 AK4P27144 223 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 GCGRP47871 477 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR2B8PP59922 312 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 CST6Q15828 149 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ENTPD8Q5MY95 495 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 FCRLBQ6BAA4 426 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 TANGO2Q6ICL3 276 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 HEPHL1Q6MZM0 1159 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ETV3LQ6ZN32 361 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 MTSS1LQ765P7 747 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 LRRC28Q86X40 367 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR1S2Q8NGQ3 325 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR13C5Q8NGS8 318 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 OR4Q3Q8NH05 313 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PIGXQ8TBF5 258 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PAQR8Q8TEZ7 354 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 THAP4Q8WY91 577 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 SAMD8Q96LT4 415 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 IGFLR1Q9H665 355 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 PHPT1Q9NRX4 125 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 ZSCAN32Q9NX65 697 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 H2AFY2Q9P0M6 372 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
SMG6-202ENST00000354901 ARHGEF17Q96PE2 2063 aaPredicted RBP8.64□□□□□ -1.03
SMG6-202ENST00000354901 A0A1W2PPE3 182 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 LRRN3E7EW58 273 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 DNAJB6O75190 326 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ERGP11308 486 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 MPIP34949 423 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 RORAP35398 523 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 PDGFRLQ15198 375 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 NDUFA9Q16795 377 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 SLC36A2Q495M3 483 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 DEFB134Q4QY38 66 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 C2orf27AQ580R0 203 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 AGBL4Q5VU57 503 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TMEM71Q6P5X7 295 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 FAM111BQ6SJ93 734 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 CPOQ8IVL8 374 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 OR5M9Q8NGP3 310 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 CDS1Q92903 461 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 IFT27Q9BW83 186 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 LRRN3Q9H3W5 708 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ADAP2Q9NPF8 381 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 MEPEQ9NQ76 525 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 ZNF780BQ9Y6R6 833 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TUBAL3A6NHL2 446 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms