RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 AADACL4Q5VUY2 407 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 NXNL2Q5VZ03 156 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 RHBDD2Q6NTF9 364 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 LINC00114Q6XXX2 140 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 WDR88Q6ZMY6 472 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 GDPGP1Q6ZNW5 385 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 TTLL10Q6ZVT0 673 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 GID4Q8IVV7 300 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 NANOGP1Q8N7R0 232 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ZNF527Q8NB42 609 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 C17orf47Q8NEP4 570 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 KBTBD8Q8NFY9 601 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OR52L1Q8NGH7 329 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OR4Q3Q8NH05 313 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OR14A16Q8NHC5 309 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 NDNFQ8TB73 568 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 FANK1Q8TC84 345 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 DOK4Q8TEW6 326 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 TM9SF4Q92544 642 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 CNOT9Q92600 299 aaKnown RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 LGALS12Q96DT0 336 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 LRFN5Q96NI6 719 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 PTCHD1Q96NR3 888 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OPALINQ96PE5 141 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 MGLLQ99685 303 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 SLC19A3Q9BZV2 496 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 SIAEQ9HAT2 523 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ZNF304Q9HCX3 659 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 FLRT3Q9NZU0 649 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 SERTAD3Q9UJW9 196 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OSGIN1Q9UJX0 560 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 MRTO4Q9UKD2 239 aaKnown RBP7.46□□□□□ -1.22
CD44-205ENST00000352818 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.46□□□□□ -1.22
CD44-205ENST00000352818 BAIAP2Q9UQB8 552 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 ERGIC3Q9Y282 383 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 OR10H1Q9Y4A9 318 aa7.46□□□□□ -1.22
CD44-205ENST00000352818 IGLV3-12A0A075B6K2 115 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 SERINC4A6NH21 518 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 BHLHE40O14503 412 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 CDC42EP2O14613 210 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 MYL12BO14950 172 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 TO15178 435 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 HCN1O60741 890 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 NTN1O95631 604 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 ONECUT2O95948 504 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 NGFRP08138 427 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 IFI30P13284 250 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 TBXA2RP21731 343 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 GADD45AP24522 165 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 HTR1FP30939 366 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 MTNR1AP48039 350 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 CLK1P49759 484 aaKnown RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 ENTPD1P49961 510 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 FXYD6P3P58550 94 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 VBP1P61758 197 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 SPHARQ15513 63 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 KLHL26Q53HC5 615 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 SLC30A6Q6NXT4 461 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 RPUSD3Q6P087 351 aaKnown RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 ULK3Q6PHR2 472 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 DMRTC2Q8IXT2 367 aaPredicted RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 CDK20Q8IZL9 346 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 LNX2Q8N448 690 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 METTL27Q8N6F8 245 aaPredicted RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 PLPP5Q8NEB5 264 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 ANKK1Q8NFD2 765 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 OR4N2Q8NGD1 307 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 OR52I1Q8NGK6 324 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 SLC2A12Q8TD20 617 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 ZNF721Q8TF20 911 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 DNAJA4Q8WW22 397 aaPredicted RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 S100ZQ8WXG8 99 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 BPIFA2Q96DR5 249 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 ZHX1-C8orf76Q96EF9 292 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 RNFT2Q96EX2 444 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 SENP5Q96HI0 755 aaPredicted RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 PLEKHA8Q96JA3 519 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 OR5M11Q96RB7 305 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 WDR12Q9GZL7 423 aaKnown RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 SLIRPQ9GZT3 109 aaKnown RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 NXF2Q9GZY0 626 aaKnown RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 OR52D1Q9H346 318 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 UBQLN3Q9H347 655 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 HHATLQ9HCP6 504 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 UBQLN4Q9NRR5 601 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 TAS2R16Q9NYV7 291 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 ICAM5Q9UMF0 924 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 SIGLEC7Q9Y286 467 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 EXOGQ9Y2C4 368 aaKnown RBP7.45□□□□□ -1.22
CD44-205ENST00000352818 MAU2Q9Y6X3 613 aa7.45□□□□□ -1.22
CD44-205ENST00000352818 A0A087WUJ7 227 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 A0A1W2PQD3 144 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 SLC19A2O60779 497 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ADAM11O75078 769 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 PTP4A3O75365 173 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 CRLF1O75462 422 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 CTAG2O75638 210 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 PPM1BO75688 479 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 KLF7O75840 302 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms