RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 IGHV5-51A0A0C4DH38 117 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 TEX13CA0A0J9YWL9 993 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 A0A1W2PPK0 400 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 SLC25A1P53007 311 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 GFERP55789 205 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 PITPNAQ00169 270 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF684Q5T5D7 378 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 SYT9Q86SS6 491 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 C17orf82Q86X59 251 aaPredicted RBP20.2■□□□□ 0.82
UPF3A-201ENST00000351487 FAM160A2Q8N612 972 aaPredicted RBP20.2■□□□□ 0.82
UPF3A-201ENST00000351487 GATSQ8NAP1 163 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 OR4D9Q8NGE8 314 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 RLN3Q8WXF3 142 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 YIPF5Q969M3 257 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 PDCD1LG2Q9BQ51 273 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 LANCL2Q9NS86 450 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 C2orf42Q9NWW7 574 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 SOHLH2Q9NX45 425 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 SLC6A5Q9Y345 797 aa20.2■□□□□ 0.82
UPF3A-201ENST00000351487 GON4LQ3T8J9 2241 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 IGHV1OR15-9A0A0B4J2B8 117 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF879B4DU55 563 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 OIP5O43482 229 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 PPICP45877 212 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 SLC37A1P57057 533 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 RAB25P57735 213 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 NTRK2Q16620 822 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 HSD17B12Q53GQ0 312 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 Q5BKY6 102 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 GHDCQ8N2G8 530 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 PTPMT1Q8WUK0 201 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-201ENST00000351487 GFM1Q96RP9 751 aaKnown RBP20.19■□□□□ 0.82
UPF3A-201ENST00000351487 ALG12Q9BV10 488 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 GALNT9Q9HCQ5 603 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 PDE7BQ9NP56 450 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 COL5A1P20908 1838 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-201ENST00000351487 CENPBD1B2RD01 187 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 CD14P08571 375 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 TNK1Q13470 666 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 LEG1Q6P5S2 330 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 EXD3Q8N9H8 876 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 LMX1AQ8TE12 382 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 Q96M85 177 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 TGM7Q96PF1 710 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 MMP25Q9NPA2 562 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 BRD7Q9NPI1 651 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 EPHA6Q9UF33 1036 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 TEKT2Q9UIF3 430 aa20.19■□□□□ 0.82
UPF3A-201ENST00000351487 PCDH15Q96QU1 1955 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF217O75362 1048 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 HPGDP15428 266 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 MST1P26927 711 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 AQP2P41181 271 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 CDKN2AP42771 156 aaKnown RBP20.18■□□□□ 0.82
UPF3A-201ENST00000351487 MAB21L1Q13394 359 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 GRM7Q14831 915 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 LYPD4Q6UWN0 246 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 PHOSPHO1Q8TCT1 267 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 HSD17B8Q92506 261 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 SLC46A1Q96NT5 459 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 SPRTNQ9H040 489 aaPredicted RBP20.18■□□□□ 0.82
UPF3A-201ENST00000351487 SLC2A4RGQ9NR83 387 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 MMACHCQ9Y4U1 282 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 A0A0B4J203 849 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 A0A1B0GTQ1 180 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 A0A1W2PR77 199 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 C7orf66A4D0T2 115 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 SCDO00767 359 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF264O43296 627 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 ASAH2BP0C7U1 165 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 SDHAP31040 664 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 UQCRC1P31930 480 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 PSMB10P40306 273 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 CBLN3Q6UW01 205 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 KRT74Q7RTS7 529 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 NUP54Q7Z3B4 507 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 TSTD1Q8NFU3 115 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 MOGAT1Q96PD6 335 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 GTPBP2Q9BX10 602 aaKnown RBP20.18■□□□□ 0.82
UPF3A-201ENST00000351487 NANSQ9NR45 359 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 MOKQ9UQ07 419 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 CAMK2AQ9UQM7 478 aa20.18■□□□□ 0.82
UPF3A-201ENST00000351487 AK6Q9Y3D8 172 aaKnown RBP20.18■□□□□ 0.82
UPF3A-201ENST00000351487 A6NL46 340 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 CTDSPLO15194 276 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 TMEM127O75204 238 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 TXNDC12O95881 172 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 SRP9P49458 86 aaKnown RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 EGR4Q05215 589 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 JAZF1Q86VZ6 243 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 PLCZ1Q86YW0 608 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 SLC35F3Q8IY50 421 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 RNF166Q96A37 237 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 GON7Q9BXV9 100 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 RAB33BQ9H082 229 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 NXF5Q9H1B4 397 aaKnown RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 CHRDQ9H2X0 955 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 DPAGT1Q9H3H5 408 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 NOX4Q9NPH5 578 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 RXFP3Q9NSD7 469 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms