RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RD3Q7Z3Z2 195 aa16.38■□□□□ 0.21
APP-202ENST00000348990 ZNF619Q8N2I2 560 aa16.38■□□□□ 0.21
APP-202ENST00000348990 TMEM185AQ8NFB2 350 aa16.38■□□□□ 0.21
APP-202ENST00000348990 PXT1Q8NFP0 134 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR51S1Q8NGJ8 323 aa16.38■□□□□ 0.21
APP-202ENST00000348990 GIMAP5Q96F15 307 aa16.38■□□□□ 0.21
APP-202ENST00000348990 ZNF471Q9BX82 626 aaPredicted RBP16.38■□□□□ 0.21
APP-202ENST00000348990 IL21RQ9HBE5 538 aa16.38■□□□□ 0.21
APP-202ENST00000348990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.38■□□□□ 0.21
APP-202ENST00000348990 ZNF223Q9UK11 482 aaPredicted RBP16.38■□□□□ 0.21
APP-202ENST00000348990 ZNF346Q9UL40 294 aaKnown RBP16.38■□□□□ 0.21
APP-202ENST00000348990 FOXJ3Q9UPW0 622 aa16.38■□□□□ 0.21
APP-202ENST00000348990 ANKRD20A5PA0PJZ0 165 aa16.38■□□□□ 0.21
APP-202ENST00000348990 GXYLT2A0PJZ3 443 aa16.38■□□□□ 0.21
APP-202ENST00000348990 PRRT4C9JH25 899 aa16.38■□□□□ 0.21
APP-202ENST00000348990 PIN1P1O15428 100 aa16.38■□□□□ 0.21
APP-202ENST00000348990 NDUFB6O95139 128 aa16.38■□□□□ 0.21
APP-202ENST00000348990 AGR2O95994 175 aa16.38■□□□□ 0.21
APP-202ENST00000348990 INHAP05111 366 aa16.38■□□□□ 0.21
APP-202ENST00000348990 TLX1P31314 330 aaPredicted RBP16.38■□□□□ 0.21
APP-202ENST00000348990 CDH26Q8IXH8 852 aa16.38■□□□□ 0.21
APP-202ENST00000348990 MUC20Q8N307 709 aaPredicted RBP16.38■□□□□ 0.21
APP-202ENST00000348990 ZNF511Q8NB15 262 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR2AK2Q8NG84 335 aa16.38■□□□□ 0.21
APP-202ENST00000348990 OR1S1Q8NH92 325 aa16.38■□□□□ 0.21
APP-202ENST00000348990 NPAS1Q99742 590 aa16.38■□□□□ 0.21
APP-202ENST00000348990 PRSS16Q9NQE7 514 aa16.38■□□□□ 0.21
APP-202ENST00000348990 TRAV18A0A075B6X5 111 aa16.37■□□□□ 0.21
APP-202ENST00000348990 LOC100509620A0A075B734 347 aa16.37■□□□□ 0.21
APP-202ENST00000348990 B3GALNT1O75752 331 aa16.37■□□□□ 0.21
APP-202ENST00000348990 ADH1AP07327 375 aa16.37■□□□□ 0.21
APP-202ENST00000348990 LIPCP11150 499 aa16.37■□□□□ 0.21
APP-202ENST00000348990 DEFB103AP81534 67 aa16.37■□□□□ 0.21
APP-202ENST00000348990 GUCA2AQ02747 115 aa16.37■□□□□ 0.21
APP-202ENST00000348990 KCNAB1Q14722 419 aa16.37■□□□□ 0.21
APP-202ENST00000348990 TAF13Q15543 124 aa16.37■□□□□ 0.21
APP-202ENST00000348990 MLF2Q15773 248 aaPredicted RBP16.37■□□□□ 0.21
APP-202ENST00000348990 ZNF546Q86UE3 836 aa16.37■□□□□ 0.21
APP-202ENST00000348990 WBP1Q96G27 269 aa16.37■□□□□ 0.21
APP-202ENST00000348990 MRPL48Q96GC5 212 aaKnown RBP16.37■□□□□ 0.21
APP-202ENST00000348990 ZNF764Q96H86 408 aaPredicted RBP16.37■□□□□ 0.21
APP-202ENST00000348990 ZNF681Q96N22 645 aa16.37■□□□□ 0.21
APP-202ENST00000348990 GRXCR1A8MXD5 290 aa16.37■□□□□ 0.21
APP-202ENST00000348990 ZFPL1O95159 310 aa16.37■□□□□ 0.21
APP-202ENST00000348990 RHOP08100 348 aa16.37■□□□□ 0.21
APP-202ENST00000348990 ADH5P11766 374 aa16.37■□□□□ 0.21
APP-202ENST00000348990 CPN1P15169 458 aa16.37■□□□□ 0.21
APP-202ENST00000348990 CMPK1P30085 196 aa16.37■□□□□ 0.21
APP-202ENST00000348990 EPHA4P54764 986 aa16.37■□□□□ 0.21
APP-202ENST00000348990 ELFN2Q5R3F8 820 aa16.37■□□□□ 0.21
APP-202ENST00000348990 PWWP2BQ6NUJ5 590 aa16.37■□□□□ 0.21
APP-202ENST00000348990 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
APP-202ENST00000348990 FAM220AQ7Z4H9 259 aa16.37■□□□□ 0.21
APP-202ENST00000348990 PAQR7Q86WK9 346 aa16.37■□□□□ 0.21
APP-202ENST00000348990 SFTPA1Q8IWL2 248 aa16.37■□□□□ 0.21
APP-202ENST00000348990 CLRN3Q8NCR9 226 aa16.37■□□□□ 0.21
APP-202ENST00000348990 OR4D10Q8NGI6 311 aa16.37■□□□□ 0.21
APP-202ENST00000348990 OR4C16Q8NGL9 310 aa16.37■□□□□ 0.21
APP-202ENST00000348990 SUSD6Q92537 303 aa16.37■□□□□ 0.21
APP-202ENST00000348990 ZNF281Q9Y2X9 895 aa16.37■□□□□ 0.21
APP-202ENST00000348990 A0A1B0GWA3 101 aa16.37■□□□□ 0.21
APP-202ENST00000348990 DISC1C4P0D8 188 aa16.37■□□□□ 0.21
APP-202ENST00000348990 OGG1O15527 345 aa16.37■□□□□ 0.21
APP-202ENST00000348990 RAD1O60671 282 aa16.37■□□□□ 0.21
APP-202ENST00000348990 PRAMEF2O60811 474 aa16.37■□□□□ 0.21
APP-202ENST00000348990 EFEMP2O95967 443 aa16.37■□□□□ 0.21
APP-202ENST00000348990 FGF2P09038 288 aa16.37■□□□□ 0.21
APP-202ENST00000348990 LAG3P18627 525 aa16.37■□□□□ 0.21
APP-202ENST00000348990 RPS11P62280 158 aaKnown RBP eCLIP16.37■□□□□ 0.21
APP-202ENST00000348990 EEF1A1P68104 462 aaKnown RBP16.37■□□□□ 0.21
APP-202ENST00000348990 RBMS2Q15434 407 aaKnown RBP16.37■□□□□ 0.21
APP-202ENST00000348990 STPG1Q5TH74 334 aa16.37■□□□□ 0.21
APP-202ENST00000348990 ZNF660Q6AZW8 331 aaPredicted RBP16.37■□□□□ 0.21
APP-202ENST00000348990 MRM1Q6IN84 353 aaKnown RBP16.37■□□□□ 0.21
APP-202ENST00000348990 GLB1L2Q8IW92 636 aa16.37■□□□□ 0.21
APP-202ENST00000348990 TSNAXQ99598 290 aaKnown RBP16.37■□□□□ 0.21
APP-202ENST00000348990 A0A1B0GTH9 108 aa16.36■□□□□ 0.21
APP-202ENST00000348990 NAT2P11245 290 aa16.36■□□□□ 0.21
APP-202ENST00000348990 NID1P14543 1247 aa16.36■□□□□ 0.21
APP-202ENST00000348990 DUSP8Q13202 625 aa16.36■□□□□ 0.21
APP-202ENST00000348990 KRT77Q7Z794 578 aa16.36■□□□□ 0.21
APP-202ENST00000348990 LINC00518Q8N0U6 118 aa16.36■□□□□ 0.21
APP-202ENST00000348990 OR2L3Q8NG85 312 aa16.36■□□□□ 0.21
APP-202ENST00000348990 OR10Z1Q8NGY1 313 aa16.36■□□□□ 0.21
APP-202ENST00000348990 CD99L2Q8TCZ2 262 aa16.36■□□□□ 0.21
APP-202ENST00000348990 ZNF707Q96C28 371 aaPredicted RBP16.36■□□□□ 0.21
APP-202ENST00000348990 DNAJA3Q96EY1 480 aa16.36■□□□□ 0.21
APP-202ENST00000348990 ADAD1Q96M93 576 aaKnown RBP16.36■□□□□ 0.21
APP-202ENST00000348990 PITHD1Q9GZP4 211 aaPredicted RBP16.36■□□□□ 0.21
APP-202ENST00000348990 LMAN2LQ9H0V9 348 aa16.36■□□□□ 0.21
APP-202ENST00000348990 MKI67P46013 3256 aaKnown RBP16.36■□□□□ 0.21
APP-202ENST00000348990 OR2M5A3KFT3 312 aa16.36■□□□□ 0.21
APP-202ENST00000348990 BLOC1S5-TXNDC5H3BN57 136 aa16.36■□□□□ 0.21
APP-202ENST00000348990 MTRF1O75570 445 aaKnown RBP16.36■□□□□ 0.21
APP-202ENST00000348990 FGF18O76093 207 aa16.36■□□□□ 0.21
APP-202ENST00000348990 LTBQ06643 244 aa16.36■□□□□ 0.21
APP-202ENST00000348990 ARHGAP11BQ3KRB8 267 aa16.36■□□□□ 0.21
APP-202ENST00000348990 PLPP4Q5VZY2 271 aa16.36■□□□□ 0.21
APP-202ENST00000348990 BEST3Q8N1M1 668 aa16.36■□□□□ 0.21
APP-202ENST00000348990 ZNF676Q8N7Q3 588 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms