RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 KDM4EB2RXH2 506 aaPredicted RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 BRINP1O60477 761 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 SBK2P0C263 348 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 UBL4AP11441 157 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 HTR4Q13639 388 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 EIF2B1Q14232 305 aaKnown RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 NSDHLQ15738 373 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 PRSS45Q7RTY3 260 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 FBLIM1Q8WUP2 373 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 BMFQ96LC9 184 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
NUP50-201ENST00000347635 YBX2Q9Y2T7 364 aaKnown RBP13.63□□□□□ -0.23
NUP50-201ENST00000347635 A0A1B0GWA3 101 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 TEX46H3BTG2 121 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 LSSP48449 732 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ARHGDIBP52566 201 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 CLRN1P58418 232 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 OVCH1Q7RTY7 1134 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 SLC43A2Q8N370 569 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 GTPBP8Q8N3Z3 284 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 NLGN4YQ8NFZ3 816 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 PHYHIPQ92561 330 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 LCMT2O60294 686 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 SRMP19623 302 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 DGCR2P98153 550 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 CHAF1BQ13112 559 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 TMEM201Q5SNT2 666 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ZNF587Q96SQ5 575 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 IER2Q9BTL4 223 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 LIN7BQ9HAP6 207 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 FBXO9Q9UK97 447 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ZNF705EA8MWA4 302 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 RGS13O14921 159 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 YY2O15391 372 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 NUPL2O15504 423 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 RAF1P04049 648 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 OR8G3PP0DMU2 310 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 CD53P19397 219 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 RBMXP38159 391 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 CDK5Q00535 292 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ARHGAP11BQ3KRB8 267 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 YIF1BQ5BJH7 314 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 PXKQ7Z7A4 578 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ZNF761Q86XN6 746 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 GIMAP5Q96F15 307 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 OR2S2Q9NQN1 319 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 MYEF2Q9P2K5 600 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 CBLCQ9ULV8 474 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 V9GYH0 126 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 KRBOX1C9JBD0 128 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 UBBP0CG47 229 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 UBCP0CG48 685 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 FGF9P31371 208 aaPredicted RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 RPS27AP62979 156 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 UBA52P62987 128 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 Q499Y3 187 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ARSKQ6UWY0 536 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 GPR32P1Q8NGA4 272 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ASB12Q8WXK4 309 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 UCN3Q969E3 161 aa13.62□□□□□ -0.23
NUP50-201ENST00000347635 ISG20L2Q9H9L3 353 aaKnown RBP13.62□□□□□ -0.23
NUP50-201ENST00000347635 NPIPB8E9PQR5 432 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 LINC01565O15544 149 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 HRGP04196 525 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 PCBP3P57721 371 aaKnown RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 OR10A3P58181 314 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 TAS2R19P59542 299 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 SORDQ00796 357 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 MANEAQ5SRI9 462 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 WBP2NLQ6ICG8 309 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 ST6GAL2Q96JF0 529 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 LINC00615Q96LM1 132 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 ALG12Q9BV10 488 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 CMC2Q9NRP2 79 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 DCDC2BA2VCK2 349 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 CHP2O43745 196 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 GABRB1P18505 474 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 PVALBP20472 110 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 IRF3Q14653 427 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 DUSP5Q16690 384 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 EID2Q8N6I1 236 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 RBM7Q9Y580 266 aaKnown RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 A0A0A6YYC8 382 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 I3L1I5 382 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 LALBAP00709 142 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 DCNP07585 359 aaKnown RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 SFTPBP07988 381 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 CCDC71Q8IV32 467 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 ANKRD53Q8N9V6 530 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 SMAP2Q8WU79 429 aaPredicted RBP13.61□□□□□ -0.23
NUP50-201ENST00000347635 SEC22CQ9BRL7 303 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 KIR3DX1Q9H7L2 352 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 SLC6A14Q9UN76 642 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 ERVK-19Q9WJR5 959 aa13.61□□□□□ -0.23
NUP50-201ENST00000347635 ETV7Q9Y603 341 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms