RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 EXOSC3Q9NQT5 275 aaKnown RBP16.8■□□□□ 0.28
SMC4-201ENST00000344722 ACOXLQ9NUZ1 547 aa16.8■□□□□ 0.28
SMC4-201ENST00000344722 ZBTB42B2RXF5 422 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 GPR171O14626 319 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 RAD52P43351 418 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 PRSS36Q5K4E3 855 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 ACOT7LQ6ZUV0 252 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 OR6T1Q8NGN1 323 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 FAM71F1Q96KD3 344 aaPredicted RBP16.79■□□□□ 0.28
SMC4-201ENST00000344722 M0R082 166 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 HOXD9P28356 352 aaPredicted RBP16.79■□□□□ 0.28
SMC4-201ENST00000344722 IMPA1P29218 277 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 FABP5Q01469 135 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 SERTAD3Q9UJW9 196 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 LGALS8O00214 317 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 TO15178 435 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 GPR137BO60478 399 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 HTD2P86397 168 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 ACY1Q03154 408 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 TLE4Q04727 773 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 ADAM5Q6NVV9 412 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 GDF7Q7Z4P5 450 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 ADGRG3Q86Y34 549 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 OR51S1Q8NGJ8 323 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 FAM213BQ8TBF2 198 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 HHIPL1Q96JK4 782 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 IKZF5Q9H5V7 419 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 LOC100289279A0A1B0GTE1 492 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 APBB3O95704 486 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 CRMP1Q14194 572 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 FAM71E1Q6IPT2 247 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 DVL3Q92997 716 aaPredicted RBP16.79■□□□□ 0.28
SMC4-201ENST00000344722 TRMT2BQ96GJ1 504 aaKnown RBP16.79■□□□□ 0.28
SMC4-201ENST00000344722 BTF3L4Q96K17 158 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 ZFYVE21Q9BQ24 234 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 ALG12Q9BV10 488 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 UBQLN3Q9H347 655 aa16.79■□□□□ 0.28
SMC4-201ENST00000344722 A0A087WZY1 265 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 EIF4EP06730 217 aaKnown RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 ACSM4P0C7M7 580 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 PTGER1P34995 402 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 ACSM1Q08AH1 577 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 TPBGQ13641 420 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 CCNJQ5T5M9 372 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 AMIGO3Q86WK7 504 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 NIPSNAP3BQ9BS92 247 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 KLF16Q9BXK1 252 aaPredicted RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 TMEFF2Q9UIK5 374 aaPredicted RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 ALKBH1Q13686 389 aaKnown RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 TBC1D20Q96BZ9 403 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 ATF6BQ99941 703 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 OCSTAMPQ9BR26 566 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 P2RY12Q9H244 342 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 HRASLSQ9HDD0 168 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 TIMM8BQ9Y5J9 83 aaPredicted RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 TRIM77I1YAP6 450 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 MGMTP16455 207 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 UBE2IP63279 158 aaKnown RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 NOGQ13253 232 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 GKN2Q86XP6 184 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 UEVLDQ8IX04 471 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 LFNGQ8NES3 379 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 OR4D6Q8NGJ1 314 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 CD1EP15812 388 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 SQSTM1Q13501 440 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 TMEM255BQ8WV15 326 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 SLC41A2Q96JW4 573 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 TNFRSF13CQ96RJ3 184 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 CHST8Q9H2A9 424 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 PURGQ9UJV8 347 aaKnown RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 M0QYG6 137 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 CNOT4O95628 575 aaKnown RBP16.78■□□□□ 0.28
SMC4-201ENST00000344722 EPHA1P21709 976 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 SLC6A11P48066 632 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 WBP2NLQ6ICG8 309 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 COX15Q7KZN9 410 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 TECPR1Q7Z6L1 1165 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 NAA40Q86UY6 237 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 KCNRGQ8N5I3 272 aa16.78■□□□□ 0.28
SMC4-201ENST00000344722 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.28
SMC4-201ENST00000344722 TMEM269A0A1B0GVZ9 245 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 TMEM72A0PK05 275 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 OR2T1O43869 369 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 SERPINE2P07093 398 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 ZNF44P15621 663 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 PLPP5Q8NEB5 264 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 POMT2Q9UKY4 750 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 B4GALT3O60512 393 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 C1SP09871 688 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 NAGAP17050 411 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 TAGLN2P37802 199 aaKnown RBP16.77■□□□□ 0.28
SMC4-201ENST00000344722 BPHLQ86WA6 291 aaPredicted RBP16.77■□□□□ 0.28
SMC4-201ENST00000344722 OR56B1Q8NGI3 324 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 FAM3DQ96BQ1 224 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 ARHGAP9Q9BRR9 750 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 TAF9BQ9HBM6 251 aa16.77■□□□□ 0.28
SMC4-201ENST00000344722 SLC35D3Q5M8T2 416 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 PRAMEF8Q5VWM4 474 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 PRAMEF7Q5VXH5 474 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms