RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 EIF4E3Q8N5X7 224 aaKnown RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ACOT4Q8N9L9 421 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 OR56A1Q8NGH5 318 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 PAQR8Q8TEZ7 354 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 VRK1Q99986 396 aaPredicted RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 PLEKHA1Q9HB21 404 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ZDHHC4Q9NPG8 344 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 KRCC1Q9NPI7 259 aaPredicted RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 SLC35A3Q9Y2D2 325 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ADAM18Q9Y3Q7 739 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 VCANP13611 3396 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 A0A1B0GW55 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 C4orf47A7E2U8 309 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF879B4DU55 563 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4L2P0CJ85 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4L3P0CJ86 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4L4P0CJ87 422 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4L5P0CJ88 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4L6P0CJ89 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4L7P0CJ90 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 SYN1P17600 705 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 ADCYAP1P18509 176 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 SNRPEP62304 92 aaKnown RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 PAN3Q58A45 887 aaKnown RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 FIGNL1Q6PIW4 674 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 PARS2Q7L3T8 475 aaKnown RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 SLC35F2Q8IXU6 374 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 SHISA5Q8N114 240 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 OR14A16Q8NHC5 309 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 RHBGQ9H310 441 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 MYEF2Q9P2K5 600 aaKnown RBP13.66□□□□□ -0.22
CLCN1-201ENST00000343257 DUX4Q9UBX2 424 aa13.66□□□□□ -0.22
CLCN1-201ENST00000343257 RAD1O60671 282 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 RCBTB2O95199 551 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 CD3DP04234 171 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 LAMP2P13473 410 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 NPBWR1P48145 328 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 ZNF136P52737 540 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 PRMT2P55345 433 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 NANOS3P60323 173 aaKnown RBP13.65□□□□□ -0.22
CLCN1-201ENST00000343257 OR7A5Q15622 319 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 OLFML2AQ68BL7 652 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 LRRTM1Q86UE6 522 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 GLB1L2Q8IW92 636 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 C3orf49Q96BT1 292 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 PTCHD1Q96NR3 888 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 SLC19A3Q9BZV2 496 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 TINAGL1Q9GZM7 467 aaPredicted RBP13.65□□□□□ -0.22
CLCN1-201ENST00000343257 POFUT1Q9H488 388 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 TCF7L1Q9HCS4 588 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 TREM1Q9NP99 234 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 C14orf105Q9NVL8 296 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 TRAV18A0A075B6X5 111 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 LRIT2A6NDA9 550 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 M0QYG6 137 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 FADS1O60427 444 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 AQP8O94778 261 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 HIST1H1CP16403 213 aaKnown RBP13.65□□□□□ -0.22
CLCN1-201ENST00000343257 NDUFS1P28331 727 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 EFNB2P52799 333 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 TEX19Q8NA77 164 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 SFT2D1Q8WV19 159 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 BARX1Q9HBU1 254 aaPredicted RBP13.65□□□□□ -0.22
CLCN1-201ENST00000343257 ADAP2Q9NPF8 381 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 SIGLEC7Q9Y286 467 aa13.65□□□□□ -0.22
CLCN1-201ENST00000343257 TRAPPC13A5PLN9 417 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 FARS2O95363 451 aaKnown RBP13.65□□□□□ -0.23
CLCN1-201ENST00000343257 GP1BAP07359 652 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 CD53P19397 219 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 CSNK1G2P78368 415 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF528Q3MIS6 628 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 AMZ1Q400G9 498 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.23
CLCN1-201ENST00000343257 RNF180Q86T96 592 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 ASPGQ86U10 573 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 KCT2Q8NC54 265 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 OR7G2Q8NG99 324 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 HSPA12BQ96MM6 686 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 ULBP3Q9BZM4 244 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 ZMAT3Q9HA38 289 aaKnown RBP13.65□□□□□ -0.23
CLCN1-201ENST00000343257 MEPEQ9NQ76 525 aaPredicted RBP13.65□□□□□ -0.23
CLCN1-201ENST00000343257 INPP5EQ9NRR6 644 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 PLEKHA6Q9Y2H5 1048 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 INSL5Q9Y5Q6 135 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 IER3IP1Q9Y5U9 82 aa13.65□□□□□ -0.23
CLCN1-201ENST00000343257 TMEM218A2RU14 115 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 F5H0A9 414 aaPredicted RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 TBX19O60806 448 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 ZFPL1O95159 310 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 FABP1P07148 127 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 ACAA1P09110 424 aaPredicted RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 AK4P27144 223 aaPredicted RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 PRKAR1BP31321 381 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 RPS27P42677 84 aaKnown RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 H3F3CQ6NXT2 135 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 STEAP2Q8NFT2 490 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 ZPLD1Q8TCW7 415 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms