RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FUCA1P04066 466 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 OR10J4P0C629 311 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PTGER4P35408 488 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 BMPR1AP36894 532 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ACAA2P42765 397 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 SSBP1Q04837 148 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 TESK1Q15569 626 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 OR4F3Q6IEY1 312 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 L3HYPDHQ96EM0 354 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PEBP4Q96S96 227 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MAP3K3Q99759 626 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 RSG1Q9BU20 258 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 POLLQ9UGP5 575 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 STEAP1Q9UHE8 339 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TMX2Q9Y320 296 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 DISP1Q96F81 1524 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 C10orf71Q711Q0 1435 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZNF814B7Z6K7 855 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SLC16A6O15403 523 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ADRB2P07550 413 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ADORA3P0DMS8 318 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 KCNE1P15382 129 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 IDSP22304 550 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CDKN1CP49918 316 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 ACSM1Q08AH1 577 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TMEM71Q6P5X7 295 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 REC114Q7Z4M0 266 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 APCDD1Q8J025 514 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 OR4K13Q8NH42 304 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 LGALS14Q8TCE9 139 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PSMF1Q92530 271 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ANAPC16Q96DE5 110 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PRR11Q96HE9 360 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 CXorf58Q96LI9 332 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ATG2AQ2TAZ0 1938 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 LGALS8O00214 317 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GABRPO00591 440 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 HOXC11O43248 304 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 SSSCA1O60232 199 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SELENOFO60613 162 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SNNO75324 88 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 HOXB5P09067 269 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ITGB8P26012 769 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 IRS1P35568 1242 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 RFX2P48378 723 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 DGKEP52429 567 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MBTPS1Q14703 1052 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 OR8G1Q15617 311 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CDONQ4KMG0 1287 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 TMEM35AQ53FP2 167 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 B3GNTL1Q67FW5 361 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 AMIGO3Q86WK7 504 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 RBMXL3Q8N7X1 1067 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 NKAIN3Q8N8D7 197 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 OR1J2Q8NGS2 313 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 POPDC3Q9HBV1 291 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 HSPB8Q9UJY1 196 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MRPL42Q9Y6G3 142 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 PHLPP1O60346 1717 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ZNF727A8MUV8 499 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 DEGS1O15121 323 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ERI3O43414 337 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 CLDN1O95832 211 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GLAP06280 429 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 CD80P33681 288 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 GPLD1P80108 840 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 PDGFRLQ15198 375 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 RPL7L1Q6DKI1 246 aaKnown RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 SIAH3Q8IW03 269 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 ARFGAP1Q8N6T3 406 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 C2CD4AQ8NCU7 369 aaPredicted RBP5.78□□□□□ -1.48
VCAN-203ENST00000343200 CERKQ8TCT0 537 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 NMUR1Q9HB89 426 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 MMP24Q9Y5R2 645 aa5.78□□□□□ -1.48
VCAN-203ENST00000343200 SOX1O00570 391 aaPredicted RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 ACKR3P25106 362 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 MPGP29372 298 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CNR2P34972 360 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PSMB2P49721 201 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 MMP15P51511 669 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CCR9P51686 369 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 GPR17Q13304 367 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ZDHHC24Q6UX98 284 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 EIF4E3Q8N5X7 224 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 SYT17Q9BSW7 474 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 GPR87Q9BY21 358 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DCAF13Q9NV06 445 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 GPR160Q9UJ42 338 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 WASHC3Q9Y3C0 194 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 HLA-DQB2P05538 268 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ADRA2BP18089 450 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DUSP1P28562 367 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 STK19P49842 368 aaPredicted RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 ERVFC1-1P60608 527 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PHF19Q5T6S3 580 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 KIAA1324Q6UXG2 1013 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 C12orf54Q6X4T0 127 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ABI3BPQ7Z7G0 1075 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms