RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CABLES2Q9BTV7 478 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 UCK1Q9HA47 277 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 GNG12Q9UBI6 72 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 A6NIZ1 184 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 SLC16A7O60669 478 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
USP47-202ENST00000339865 SCGB1A1P11684 91 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 RAP1BP61224 184 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 RAB3CQ96E17 227 aa12.02□□□□□ -0.49
USP47-202ENST00000339865 LRIT2A6NDA9 550 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ADH1BP00325 375 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 TXNRD3NBQ6F5E7 133 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ZNF322Q6U7Q0 402 aaPredicted RBP12.01□□□□□ -0.49
USP47-202ENST00000339865 DECR2Q9NUI1 292 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 NRP1O14786 923 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 S100A8P05109 93 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 MTCP1P56278 107 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 IRF4Q15306 451 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ZNF468Q5VIY5 522 aaPredicted RBP12.01□□□□□ -0.49
USP47-202ENST00000339865 OR4F15Q8NGB8 312 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 BORCS6Q96GS4 357 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 GPR78Q96P69 363 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 RNF17Q9BXT8 1623 aaKnown RBP12.01□□□□□ -0.49
USP47-202ENST00000339865 CLEC20AQ6ZU45 233 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 OR5A2Q8NGI9 324 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 NUDT22Q9BRQ3 303 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 SLC2A4RGQ9NR83 387 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 HS3ST4Q9Y661 456 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ITGAMP11215 1152 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ITGB8P26012 769 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 CATR1Q13166 79 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 IKZF1Q13422 519 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 CD300LGQ6UXG3 332 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ADIPOR2Q86V24 386 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 AGLP35573 1532 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 A0A0D9SEW6 157 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 LY86O95711 162 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 EOMESO95936 686 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 MC3RP41968 323 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 RPS21P63220 83 aaKnown RBP12.01□□□□□ -0.49
USP47-202ENST00000339865 KEAP1Q14145 624 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.01□□□□□ -0.497e-6■■■■□ 20.8
USP47-202ENST00000339865 ABHD17BQ5VST6 288 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 C2orf15Q8WU43 125 aaKnown RBP12.01□□□□□ -0.49
USP47-202ENST00000339865 TMEM239Q8WW34 195 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 SPP1P10451 314 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ENPP1P22413 925 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 FABP9Q0Z7S8 132 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 HSD17B8Q92506 261 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 DPH7Q9BTV6 452 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 PIGMQ9H3S5 423 aa12.01□□□□□ -0.49
USP47-202ENST00000339865 ZMAT3Q9HA38 289 aaKnown RBP12.01□□□□□ -0.49
USP47-202ENST00000339865 GABRPO00591 440 aa12□□□□□ -0.49
USP47-202ENST00000339865 H3F3AP84243 136 aa12□□□□□ -0.49
USP47-202ENST00000339865 SHC2P98077 582 aa12□□□□□ -0.49
USP47-202ENST00000339865 TEX261Q6UWH6 196 aa12□□□□□ -0.49
USP47-202ENST00000339865 DTD1Q8TEA8 209 aa12□□□□□ -0.49
USP47-202ENST00000339865 FOXJ1Q92949 421 aa12□□□□□ -0.49
USP47-202ENST00000339865 AMBRA1Q9C0C7 1298 aa12□□□□□ -0.49
USP47-202ENST00000339865 ENPP4Q9Y6X5 453 aa12□□□□□ -0.49
USP47-202ENST00000339865 U3KQ87 197 aa12□□□□□ -0.49
USP47-202ENST00000339865 RALGAPA1Q6GYQ0 2036 aa12□□□□□ -0.49
USP47-202ENST00000339865 FAM186AA6NE01 2351 aa12□□□□□ -0.49
USP47-202ENST00000339865 RFC3P40938 356 aa12□□□□□ -0.49
USP47-202ENST00000339865 TNFRSF17Q02223 184 aa12□□□□□ -0.49
USP47-202ENST00000339865 GPR18Q14330 331 aa12□□□□□ -0.49
USP47-202ENST00000339865 BAK1Q16611 211 aa12□□□□□ -0.49
USP47-202ENST00000339865 CPEB2Q7Z5Q1 589 aaKnown RBP12□□□□□ -0.49
USP47-202ENST00000339865 SIAH1Q8IUQ4 282 aa12□□□□□ -0.49
USP47-202ENST00000339865 RNF175Q8N4F7 328 aa12□□□□□ -0.49
USP47-202ENST00000339865 OR52B6Q8NGF0 335 aa12□□□□□ -0.49
USP47-202ENST00000339865 H7BYZ3 331 aa12□□□□□ -0.49
USP47-202ENST00000339865 HSD17B7P56937 341 aa12□□□□□ -0.49
USP47-202ENST00000339865 SLC10A6Q3KNW5 377 aa12□□□□□ -0.49
USP47-202ENST00000339865 IER5LQ5T953 404 aa12□□□□□ -0.49
USP47-202ENST00000339865 GPR119Q8TDV5 335 aa12□□□□□ -0.49
USP47-202ENST00000339865 ZNF566Q969W8 418 aa12□□□□□ -0.49
USP47-202ENST00000339865 SMOQ99835 787 aa12□□□□□ -0.49
USP47-202ENST00000339865 GPR174Q9BXC1 333 aa12□□□□□ -0.49
USP47-202ENST00000339865 LINC00597Q9H2U6 94 aa12□□□□□ -0.49
USP47-202ENST00000339865 SIAEQ9HAT2 523 aa12□□□□□ -0.49
USP47-202ENST00000339865 TBPP20226 339 aa12□□□□□ -0.49
USP47-202ENST00000339865 GNB1P62873 340 aa12□□□□□ -0.49
USP47-202ENST00000339865 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
USP47-202ENST00000339865 ZNF154Q13106 437 aa12□□□□□ -0.49
USP47-202ENST00000339865 ENDOGQ14249 297 aaKnown RBP12□□□□□ -0.49
USP47-202ENST00000339865 SLC5A12Q1EHB4 618 aa12□□□□□ -0.49
USP47-202ENST00000339865 LCN8Q6JVE9 175 aa12□□□□□ -0.49
USP47-202ENST00000339865 IGDCC3Q8IVU1 814 aa12□□□□□ -0.49
USP47-202ENST00000339865 HHLA2Q9UM44 414 aa12□□□□□ -0.49
USP47-202ENST00000339865 KPTNQ9Y664 436 aa12□□□□□ -0.49
USP47-202ENST00000339865 CACNA1BQ00975 2339 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms