RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 UBE2MP61081 183 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RPS15P62841 145 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CHAF1BQ13112 559 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 GINS1Q14691 196 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF574Q6ZN55 896 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C5orf24Q7Z6I8 188 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 WDR5BQ86VZ2 330 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MUC20Q8N307 709 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 HJURPQ8NCD3 748 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 OR10H5Q8NGA6 315 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 OR52N2Q8NGI0 321 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 OR6X1Q8NH79 312 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TFGQ92734 400 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TM4SF18Q96CE8 201 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SEMA3CQ99985 751 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MFFQ9GZY8 342 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 POLR2J3Q9H1A7 115 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TMPRSS5Q9H3S3 457 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 LRRN3Q9H3W5 708 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 UQCC1Q9NVA1 299 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TMEM248Q9NWD8 314 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TNFSF18Q9UNG2 199 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PRSS21Q9Y6M0 314 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CXorf65A6NEN9 183 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ARHGEF33A8MVX0 844 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RNASET2O00584 256 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PLPP2O43688 288 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CREBL2O60519 120 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 NDUFS3O75489 264 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C6orf47O95873 294 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ADH1CP00326 375 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ARAFP10398 606 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 EPXP11678 715 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SNRPBP14678 240 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 HIST1H1BP16401 226 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ADH6P28332 368 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 VIPR2P41587 438 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RGRP47804 291 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SLC6A12P48065 614 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ART1P52961 327 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 F2RL1P55085 397 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 NHLH1Q02575 133 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF235Q14590 738 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TGIF1Q15583 401 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 GPRC6AQ5T6X5 926 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RNF219Q5W0B1 726 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 LIN54Q6MZP7 749 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 APOOLQ6UXV4 268 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SSX9Q7RTT3 188 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SLC29A4Q7RTT9 530 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ANGPTL5Q86XS5 388 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 DCUN1D3Q8IWE4 304 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MEIOBQ8N635 442 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF383Q8NA42 475 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TEX19Q8NA77 164 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF511Q8NB15 262 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 BBS1Q8NFJ9 593 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 OR2AK2Q8NG84 335 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PIGKQ92643 395 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RSRP1Q9BUV0 290 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MFRPQ9BY79 579 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C1orf198Q9H425 327 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MIEF1Q9NQG6 463 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 IL20RAQ9UHF4 553 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CA14Q9ULX7 337 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CORO2BQ9UQ03 480 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 TP53TG5Q9Y2B4 290 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MRPS23Q9Y3D9 190 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 WNT6Q9Y6F9 365 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 FXYD6-FXYD2A0A087WZ82 144 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 K7ERQ8 282 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 MAN2B1O00754 1011 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 IMPA2O14732 288 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 EPHX1P07099 455 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RHOCP08134 193 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SAGP10523 405 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 RNH1P13489 461 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CR2P20023 1033 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 DGKGP49619 791 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 DLX5P56178 289 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF177Q13360 481 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 PEA15Q15121 130 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF239Q16600 458 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CCDC157Q569K6 752 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ADNP2Q6IQ32 1131 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 IZUMO1Q8IYV9 350 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZNF561Q8N587 486 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 C17orf47Q8NEP4 570 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 OR52I2Q8NH67 350 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 AKR7LQ8NHP1 331 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 CSGALNACT1Q8TDX6 532 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 SCARF2Q96GP6 870 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 ZCCHC2Q9C0B9 1178 aaKnown RBP5.13□□□□□ -1.59
CSDE1-202ENST00000339438 FXYD6Q9H0Q3 95 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 EGLN3Q9H6Z9 239 aa5.13□□□□□ -1.59
CSDE1-202ENST00000339438 A0A1B0GTI1 187 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 H3BN98 237 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 M0R296 226 aa5.12□□□□□ -1.59
CSDE1-202ENST00000339438 SFTPBP07988 381 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms