RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 TMEM99Q8N816 258 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 SCAIQ8N9R8 606 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 OR5J2Q8NH18 312 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 FAM57AQ8TBR7 257 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 ZPLD1Q8TCW7 415 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 CPNE4Q96A23 557 aaPredicted RBP12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 ZHX1-C8orf76Q96EF9 292 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 UCN2Q96RP3 112 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 RBM4BQ9BQ04 359 aaKnown RBP12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 RBM4Q9BWF3 364 aaKnown RBP12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 ASPNQ9BXN1 380 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 MRPL39Q9NYK5 338 aaKnown RBP12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 POLEQ07864 2286 aa12.28□□□□□ -0.44
TUBA1B-202ENST00000336023 TRAV27A0A087WT01 109 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 IGHV3-15A0A0B4J1V0 119 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 UNC119BA6NIH7 251 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 CLCA1A8K7I4 914 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 AHRRA9YTQ3 701 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 ZNF814B7Z6K7 855 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 BLOC1S5-TXNDC5H3BN57 136 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 SOCS2O14508 198 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 EI24O14681 340 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 SLC19A2O60779 497 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 PPP2R2BQ00005 443 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 COX10Q12887 443 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 PMS2P3Q13401 168 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 PON3Q15166 354 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 ZNF239Q16600 458 aaKnown RBP12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 SOWAHCQ53LP3 525 aaPredicted RBP12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 KDM4DQ6B0I6 523 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 CD300LDQ6UXZ3 194 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 H1FNTQ75WM6 255 aaPredicted RBP12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 NANOGNBQ7Z5D8 188 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 CD163Q86VB7 1156 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 OR51A7Q8NH64 312 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 ROBO4Q8WZ75 1007 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 TNFRSF13CQ96RJ3 184 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 OSBPL10Q9BXB5 764 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 UCK2Q9BZX2 261 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 CHST11Q9NPF2 352 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 B3GALT5Q9Y2C3 310 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 ZNF835Q9Y2P0 537 aa12.27□□□□□ -0.44
TUBA1B-202ENST00000336023 PLPP3O14495 311 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 PRRG2O14669 202 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 SMAD9O15198 467 aaKnown RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 PTP4A3O75365 173 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 SYNGR4O95473 234 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ALPLP05186 524 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 GSTM3P21266 225 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 FHL1Q13642 323 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 DAG1Q14118 895 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ZBED5Q49AG3 693 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 OGFRL1Q5TC84 451 aaPredicted RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 KLHL17Q6TDP4 642 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 PLXDC2Q6UX71 529 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ADGRE4PQ86SQ3 457 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 FNDC9Q8TBE3 224 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 MAGEE2Q8TD90 523 aaPredicted RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 NRG4Q8WWG1 115 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 PAPOLBQ9NRJ5 636 aaKnown RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 TMEFF2Q9UIK5 374 aaPredicted RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 SIGLEC7Q9Y286 467 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 AQP7P3A6NL99 342 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 FIGNL2A6NMB9 653 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 B8ZZF3 427 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 RAMP1O60894 148 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 WDR1O75083 606 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 OR6A2O95222 327 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ADORA3P0DMS8 318 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 GABRA1P14867 456 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 AQP2P41181 271 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 P2RY4P51582 365 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ALDH3A2P51648 485 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 RPS4XP62701 263 aaKnown RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 IL1RL1Q01638 556 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.451e-8■■■□□ 15.9
TUBA1B-202ENST00000336023 ANKDD1AQ495B1 522 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ACSF3Q4G176 576 aaPredicted RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 Q6ZPB1 254 aaPredicted RBP12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 RASSF6Q6ZTQ3 369 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 DOLPP1Q86YN1 238 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 KDM8Q8N371 416 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 DNAJC9Q8WXX5 260 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 TRIB1Q96RU8 372 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 PRRG4Q9BZD6 226 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 KRT84Q9NSB2 600 aa12.26□□□□□ -0.45
TUBA1B-202ENST00000336023 TAS2R5Q9NYW4 299 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms