RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PITPNC1Q9UKF7 332 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 C19orf53Q9UNZ5 99 aaPredicted RBP7.96□□□□□ -1.13
TDP1-201ENST00000335725 CAMK2AQ9UQM7 478 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 SIGLEC1Q9BZZ2 1709 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 ZAR1LA6NP61 321 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 AIFM1O95831 613 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 CD5P06127 495 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 C1SP09871 688 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 SLC25A4P12235 298 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 CCND3P30281 292 aaPredicted RBP7.96□□□□□ -1.13
TDP1-201ENST00000335725 RAC3P60763 192 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 IL10RAQ13651 578 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 BTNL3Q6UXE8 466 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 ZNF836Q6ZNA1 936 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 NDUFAF7Q7L592 441 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 WDTC1Q8N5D0 677 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 SLC35G3Q8N808 338 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 OR14C36Q8NHC7 312 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 TMEM19Q96HH6 336 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 AIF1LQ9BQI0 150 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 SYT17Q9BSW7 474 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 SRMSQ9H3Y6 488 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 HRASLSQ9HDD0 168 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 ASB6Q9NWX5 421 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 FAM96BQ9Y3D0 163 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 WIF1Q9Y5W5 379 aa7.96□□□□□ -1.13
TDP1-201ENST00000335725 ANKRD20A5PA0PJZ0 165 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BKO60814 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 FBXO24O75426 580 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 ZNF432O94892 652 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BJP06899 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 CYC1P08574 325 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BOP23527 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BBP33778 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 KDELR2P33947 212 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 RAB7AP51149 207 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 H2BFSP57053 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BDP58876 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BCP62807 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 DGCR2P98153 550 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 EFNB1P98172 346 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 NAAAQ02083 359 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 TEAD2Q15562 447 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.14
TDP1-201ENST00000335725 C1orf194Q5T5A4 169 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 MFSD14CQ5VZR4 134 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 LGI4Q8N135 537 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 INO80EQ8NBZ0 244 aaPredicted RBP7.96□□□□□ -1.14
TDP1-201ENST00000335725 OR4F15Q8NGB8 312 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 GRHL3Q8TE85 626 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 LRRN4Q8WUT4 740 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 SMIM4Q8WVI0 70 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 WDR89Q96FK6 387 aaPredicted RBP7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 FSD1LQ9BXM9 530 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 OR8D2Q9GZM6 311 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 KCNE5Q9UJ90 142 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
TDP1-201ENST00000335725 SERPINE3A8MV23 424 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 C4BPAP04003 597 aaKnown RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 APODP05090 189 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 HMGB2P26583 209 aaKnown RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 CNR2P34972 360 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 APLNRP35414 380 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 RBM34P42696 430 aaKnown RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 TAF6P49848 677 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 PGGT1BP53609 377 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 HENMT1Q5T8I9 393 aaKnown RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 CXorf57Q6NSI4 855 aaKnown RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 DPY19L2P2Q6ZN68 376 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 FAM83HQ6ZRV2 1179 aaPredicted RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 CATSPERDQ86XM0 798 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 FBXO16Q8IX29 292 aaPredicted RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 BEST3Q8N1M1 668 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 AGBL5Q8NDL9 886 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 OR4S1Q8NGB4 309 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 SORCS1Q8WY21 1168 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 BPIFA2Q96DR5 249 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 TECTBQ96PL2 329 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 STACQ99469 402 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 ELOVL1Q9BW60 279 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 SLC25A31Q9H0C2 315 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 PLEKHA2Q9HB19 425 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 MYNNQ9NPC7 610 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 PLSCR4Q9NRQ2 329 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 ZNF70Q9UC06 446 aaPredicted RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 TNFSF18Q9UNG2 199 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 EXOSC1Q9Y3B2 195 aaKnown RBP7.95□□□□□ -1.14
TDP1-201ENST00000335725 GABRPO00591 440 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 SPINT1O43278 529 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 TK1P04183 234 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 CHRM4P08173 479 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 ETFAP13804 333 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 NMBRP28336 390 aa7.95□□□□□ -1.14
TDP1-201ENST00000335725 RPL4P36578 427 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms