RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 OR4N5Q8IXE1 308 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 LCORQ96JN0 433 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 SPHK2Q9NRA0 654 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 CFAP54Q96N23 3096 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OR2M5A3KFT3 312 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 ANKRD61A6NGH8 418 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 MOSPD3O75425 235 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 SNAPC5O75971 98 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OR2A4O95047 310 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 PAPLNO95428 1278 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 RLN2P04090 185 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 MAOBP27338 520 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 WASP42768 502 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 P2RX1P51575 399 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 H2BFSP57053 126 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 DHODHQ02127 395 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 CBFBQ13951 182 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 ARHGAP19Q14CB8 494 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 C4orf46Q504U0 113 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 FAM199XQ6PEV8 388 aaPredicted RBP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 DNAAF1Q8NEP3 725 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 OR2A7Q96R45 310 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 AICDAQ9GZX7 198 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.64□□□□□ -0.39
SYNE3-201ENST00000334258 PLCL2Q9UPR0 1127 aa12.64□□□□□ -0.39
SYNE3-201ENST00000334258 H3BSH0 61 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 H7C2Y5 167 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 GNB5O14775 395 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 CDK2P24941 298 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 GRPRP30550 384 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 BCL6P41182 706 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ART1P52961 327 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 S100A12P80511 92 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 MC2RQ01718 297 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF124Q15973 351 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 Q3ZCU0 254 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SLC48A1Q6P1K1 146 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SEZ6L2Q6UXD5 910 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 LINC01555Q8NAE3 123 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 OR5M9Q8NGP3 310 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 OR6K6Q8NGW6 343 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SLC25A38Q96DW6 304 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 TNFRSF13CQ96RJ3 184 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PRSS27Q9BQR3 290 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 TMPRSS13Q9BYE2 586 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 EDARQ9UNE0 448 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 GPR34Q9UPC5 381 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SNRPGP15A8MWD9 76 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ACOT7O00154 380 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SMAD9O15198 467 aaKnown RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 LATO43561 262 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 NDUFB6O95139 128 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 F3P13726 295 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 TYRP1P17643 537 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SOX2P48431 317 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 BTN3A2P78410 334 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 TCEA2Q15560 299 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 RPE65Q16518 533 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 C2orf68Q2NKX9 166 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PCGF3Q3KNV8 242 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 TMEM35AQ53FP2 167 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 EIPR1Q53HC9 387 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF660Q6AZW8 331 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 FAM111BQ6SJ93 734 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 MTSS1LQ765P7 747 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PMM1Q92871 262 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SGK3Q96BR1 496 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 MS4A6EQ96DS6 147 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 MRPS24Q96EL2 167 aaKnown RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 LRIG1Q96JA1 1093 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 MRGPRX3Q96LB0 322 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ADAP2Q9NPF8 381 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PRDM9Q9NQV7 894 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SIGLEC7Q9Y286 467 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 V9GY05 133 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 C4orf51C9J302 202 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ADH7P40394 386 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PRDX1Q06830 199 aaKnown RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 ABHD17CQ6PCB6 329 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PAQR7Q86WK9 346 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 C12orf40Q86WS4 652 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 NAXDQ8IW45 347 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 PXT1Q8NFP0 134 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 LINC00615Q96LM1 132 aaPredicted RBP12.63□□□□□ -0.39
SYNE3-201ENST00000334258 TCF7L1Q9HCS4 588 aa12.63□□□□□ -0.39
SYNE3-201ENST00000334258 SPTBP11277 2137 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 A0A1W2PPV9 198 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 TSPAN11A1L157 253 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 VEGFDO43915 354 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 RPP14O95059 124 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms