RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 COPZ2Q9P299 210 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 B3GALT1Q9Y5Z6 326 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 A0A1B0GX78 115 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 GALR3O60755 368 aaPredicted RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 HTR2BP41595 481 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 TIAL1Q01085 375 aaKnown RBP eCLIP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SLC2A12Q8TD20 617 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 CHP2O43745 196 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 RAB3DO95716 219 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 ZNF806P0C7X5 589 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 HLA-DMAP28067 261 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 SIRPAP78324 504 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 RABEPKQ7Z6M1 372 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 CD163Q86VB7 1156 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 TSLPQ969D9 159 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 OR14A2Q96R54 314 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 TAS2R8Q9NYW2 309 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 SLC17A4Q9Y2C5 497 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 SLC22A7Q9Y694 548 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 TRHRP34981 398 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 COL28A1Q2UY09 1125 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 LRRC28Q86X40 367 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 LRRC56Q8IYG6 542 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 AMER3Q8N944 861 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 CNRIP1Q96F85 164 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 ACAD8Q9UKU7 415 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 GREB1LQ9C091 1923 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 TRAV36DV7A0A075B6V5 113 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 NOTOA8MTQ0 251 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 OR7A10O76100 309 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 GABARAPO95166 117 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 NPR2P20594 1047 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 BIDP55957 195 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 FTMTQ8N4E7 242 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 MFSD8Q8NHS3 518 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 DEDD2Q8WXF8 326 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 MSANTD3Q96H12 275 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 STEAP3Q658P3 488 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 OR5D14Q8NGL3 314 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 Q96M85 177 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 ZNF578Q96N58 590 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 EVA1AQ9H8M9 152 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 REV1Q9UBZ9 1251 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 HHLA2Q9UM44 414 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 PPIL1Q9Y3C6 166 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 KCNE3Q9Y6H6 103 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 IGLV3-16A0A075B6K0 115 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 MEGF11A6BM72 1044 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 CENPBD1B2RD01 187 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 GABRG2P18507 467 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 PRPH2P23942 346 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 SLC35A2P78381 396 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 TP53I13Q8NBR0 393 aaPredicted RBP12□□□□□ -0.49
VSTM4-202ENST00000332853 KLHL13Q9P2N7 655 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 MED16Q9Y2X0 877 aa12□□□□□ -0.49
VSTM4-202ENST00000332853 CNOT4O95628 575 aaKnown RBP11.99□□□□□ -0.49
VSTM4-202ENST00000332853 OR2T7P0C7T2 308 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 SERPINA2P20848 420 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 GARNL3Q5VVW2 1013 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 UBE2UQ5VVX9 321 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 OPN5Q6U736 354 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 OR2T27Q8NH04 317 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 TOMM40LQ969M1 308 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 MMACHCQ9Y4U1 282 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 ASB4Q9Y574 426 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 KLK4Q9Y5K2 254 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 NUBP2Q9Y5Y2 271 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 NID1P14543 1247 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 SNRPGP62308 76 aaKnown RBP11.99□□□□□ -0.49
VSTM4-202ENST00000332853 IHHQ14623 411 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 PRSS36Q5K4E3 855 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 TCTN3Q6NUS6 607 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 DPY19L2P2Q6ZN68 376 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 OR7G1Q8NGA0 311 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 HMGCLL1Q8TB92 370 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 UCN3Q969E3 161 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 GABARAPL1Q9H0R8 117 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 CHRDQ9H2X0 955 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 FKBP14Q9NWM8 211 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 ZNF226Q9NYT6 803 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 GAPDHSO14556 408 aaPredicted RBP11.99□□□□□ -0.49
VSTM4-202ENST00000332853 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
VSTM4-202ENST00000332853 UBE2NLQ5JXB2 153 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 ESPNLQ6ZVH7 1005 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 ULBP2Q9BZM5 246 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 NTN4Q9HB63 628 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 MBD1Q9UIS9 605 aaPredicted RBP11.99□□□□□ -0.49
VSTM4-202ENST00000332853 A0A1W2PPC4 97 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 H7C417 338 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 TFP02787 698 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 SERPINA5P05154 406 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 HOXB3P14651 431 aaPredicted RBP11.99□□□□□ -0.49
VSTM4-202ENST00000332853 EMDP50402 254 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 SSR4P51571 173 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 C17orf67Q0P5P2 114 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 TMEM244Q5VVB8 128 aa11.99□□□□□ -0.49
VSTM4-202ENST00000332853 NIPAL3Q6P499 406 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms