RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 DKKL1Q9UK85 242 aa8.79□□□□□ -1
SYN3-201ENST00000332840 BLOC1S6Q9UL45 172 aa8.79□□□□□ -1
SYN3-201ENST00000332840 GTF3C1Q12789 2109 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ZFHX3Q15911 3703 aa8.78□□□□□ -1
SYN3-201ENST00000332840 MTORP42345 2549 aa8.78□□□□□ -1
SYN3-201ENST00000332840 A0A0B4J2E0 115 aa8.78□□□□□ -1
SYN3-201ENST00000332840 A0A1B0GWA3 101 aa8.78□□□□□ -1
SYN3-201ENST00000332840 A0A1B0GX12 115 aa8.78□□□□□ -1
SYN3-201ENST00000332840 TRIM64A6NGJ6 449 aa8.78□□□□□ -1
SYN3-201ENST00000332840 A6NHS1 94 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ZAR1LA6NP61 321 aa8.78□□□□□ -1
SYN3-201ENST00000332840 HSPB2A8KAH6 182 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ALG1L2C9J202 215 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ZNF264O43296 627 aa8.78□□□□□ -1
SYN3-201ENST00000332840 FADS1O60427 444 aa8.78□□□□□ -1
SYN3-201ENST00000332840 MPZL2O60487 215 aa8.78□□□□□ -1
SYN3-201ENST00000332840 EIF4E2O60573 245 aaKnown RBP8.78□□□□□ -1
SYN3-201ENST00000332840 BCAS1O75363 584 aaPredicted RBP8.78□□□□□ -1
SYN3-201ENST00000332840 LYPD3O95274 346 aa8.78□□□□□ -1
SYN3-201ENST00000332840 CLPTM1O96005 669 aa8.78□□□□□ -1
SYN3-201ENST00000332840 LINGO3P0C6S8 592 aa8.78□□□□□ -1
SYN3-201ENST00000332840 CCDC159P0C7I6 412 aa8.78□□□□□ -1
SYN3-201ENST00000332840 SMIM18P0DKX4 95 aa8.78□□□□□ -1
SYN3-201ENST00000332840 COX6B1P14854 86 aa8.78□□□□□ -1
SYN3-201ENST00000332840 CHMP24386 653 aa8.78□□□□□ -1
SYN3-201ENST00000332840 POU1F1P28069 291 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ELK4P28324 431 aa8.78□□□□□ -1
SYN3-201ENST00000332840 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
SYN3-201ENST00000332840 EPHA2P29317 976 aa8.78□□□□□ -1
SYN3-201ENST00000332840 PEX19P40855 299 aa8.78□□□□□ -1
SYN3-201ENST00000332840 PTGDSP41222 190 aa8.78□□□□□ -1
SYN3-201ENST00000332840 OMPP47874 163 aa8.78□□□□□ -1
SYN3-201ENST00000332840 SLC6A8P48029 635 aa8.78□□□□□ -1
SYN3-201ENST00000332840 DSCR4P56555 118 aaPredicted RBP8.78□□□□□ -1
SYN3-201ENST00000332840 CDC42P60953 191 aa8.78□□□□□ -1
SYN3-201ENST00000332840 CXCR4P61073 352 aa8.78□□□□□ -1
SYN3-201ENST00000332840 CSNK2BP67870 215 aa8.78□□□□□ -1
SYN3-201ENST00000332840 TUBA4AP68366 448 aa8.78□□□□□ -1
SYN3-201ENST00000332840 TEKQ02763 1124 aa8.78□□□□□ -1
SYN3-201ENST00000332840 PMPCAQ10713 525 aa8.78□□□□□ -1
SYN3-201ENST00000332840 APOFQ13790 326 aa8.78□□□□□ -1
SYN3-201ENST00000332840 MAD2L1BPQ15013 274 aaPredicted RBP8.78□□□□□ -1
SYN3-201ENST00000332840 PTGES3Q15185 160 aaKnown RBP8.78□□□□□ -1
SYN3-201ENST00000332840 HSPB2Q16082 182 aa8.78□□□□□ -1
SYN3-201ENST00000332840 SLC25A35Q3KQZ1 300 aa8.78□□□□□ -1
SYN3-201ENST00000332840 RIPPLY2Q5TAB7 128 aa8.78□□□□□ -1
SYN3-201ENST00000332840 SP5Q6BEB4 398 aaPredicted RBP8.78□□□□□ -1
SYN3-201ENST00000332840 ULK3Q6PHR2 472 aa8.78□□□□□ -1
SYN3-201ENST00000332840 RASSF6Q6ZTQ3 369 aa8.78□□□□□ -1
SYN3-201ENST00000332840 MISPQ8IVT2 679 aa8.78□□□□□ -1
SYN3-201ENST00000332840 CDK20Q8IZL9 346 aa8.78□□□□□ -1
SYN3-201ENST00000332840 WDSUB1Q8N9V3 476 aa8.78□□□□□ -1
SYN3-201ENST00000332840 FAM71CQ8NEG0 241 aa8.78□□□□□ -1
SYN3-201ENST00000332840 LILRB4Q8NHJ6 448 aa8.78□□□□□ -1
SYN3-201ENST00000332840 RNF217Q8TC41 542 aa8.78□□□□□ -1
SYN3-201ENST00000332840 DNAJA4Q8WW22 397 aaPredicted RBP8.78□□□□□ -1
SYN3-201ENST00000332840 TMEM239Q8WW34 195 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ABTB1Q969K4 478 aaPredicted RBP8.78□□□□□ -1
SYN3-201ENST00000332840 ZNF566Q969W8 418 aa8.78□□□□□ -1
SYN3-201ENST00000332840 LRRC46Q96FV0 321 aa8.78□□□□□ -1
SYN3-201ENST00000332840 TIMP4Q99727 224 aa8.78□□□□□ -1
SYN3-201ENST00000332840 LAT2Q9GZY6 243 aa8.78□□□□□ -1
SYN3-201ENST00000332840 KCNJ16Q9NPI9 418 aa8.78□□□□□ -1
SYN3-201ENST00000332840 ALKBH4Q9NXW9 302 aa8.78□□□□□ -1
SYN3-201ENST00000332840 FLRT3Q9NZU0 649 aa8.78□□□□□ -1
SYN3-201ENST00000332840 RNF6Q9Y252 685 aa8.78□□□□□ -1
SYN3-201ENST00000332840 TMEM5Q9Y2B1 443 aa8.78□□□□□ -1
SYN3-201ENST00000332840 FAM215AQ9Y5M1 114 aa8.78□□□□□ -1
SYN3-201ENST00000332840 HEATR5AQ86XA9 2040 aa8.78□□□□□ -1
SYN3-201ENST00000332840 IGLV3-32A0A0A0MS00 114 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 CD8B2A6NJW9 211 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 H3BN98 237 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 DVL2O14641 736 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 ZNHIT1O43257 154 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 NDUFB5O43674 189 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 SCO2O43819 266 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 ANGPTL1O95841 491 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 IL2RAP01589 272 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 TP53P04637 393 aaPredicted RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 GLI4P10075 376 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 CPN1P15169 458 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 BMP7P18075 431 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 FPR3P25089 353 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 DPP4P27487 766 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 RBM34P42696 430 aaKnown RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 RPL5P46777 297 aaKnown RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 GTF2A1P52655 376 aaPredicted RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 GAS1P54826 345 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 GABARAPL2P60520 117 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 PRKCDQ05655 676 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 C17orf67Q0P5P2 114 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 CD226Q15762 336 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 BCL2A1Q16548 175 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 CTU2Q2VPK5 515 aaKnown RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 GLYR1Q49A26 553 aaPredicted RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 ACSF3Q4G176 576 aaPredicted RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 ALG10BQ5I7T1 473 aa8.77□□□□□ -1.01
SYN3-201ENST00000332840 WIPI1Q5MNZ9 446 aaPredicted RBP8.77□□□□□ -1.01
SYN3-201ENST00000332840 SLX4IPQ5VYV7 408 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms