RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 GATSQ8NAP1 163 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 C1orf162Q8NEQ5 155 aaPredicted RBP12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 OR4A15Q8NGL6 344 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 FBXO30Q8TB52 745 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 SH3YL1Q96HL8 342 aaPredicted RBP12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 GPA33Q99795 319 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 BTBD2Q9BX70 525 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 HOXD1Q9GZZ0 328 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 PIGUQ9H490 435 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 WDR55Q9H6Y2 383 aaPredicted RBP12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 C7orf69Q9H7B7 122 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 OPN4Q9UHM6 478 aa12.72□□□□□ -0.37
CTHRC1-201ENST00000330295 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 IGHV1-18A0A0C4DH31 117 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 A0A1W2PNR3 127 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 GXYLT2A0PJZ3 443 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 SH3PXD2BA1X283 911 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 H3BNH8 94 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 SCDO00767 359 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 UBDO15205 165 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 CPSF4O95639 269 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 AGR2O95994 175 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 CRYAAP02489 173 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ACP2P11117 423 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 PCGF2P35227 344 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 LOXL3P58215 753 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 PRPS1P60891 318 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 HBA1P69905 142 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 DUSP5Q16690 384 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 GSTA3Q16772 222 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ELFN2Q5R3F8 820 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ATAD3BQ5T9A4 648 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 C9orf135Q5VTT2 229 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 CDC73Q6P1J9 531 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 SPATC1Q76KD6 591 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ZNF527Q8NB42 609 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 SLC16A11Q8NCK7 471 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 PIK3R3Q92569 461 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 GIMAP5Q96F15 307 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 KATNB1Q9BVA0 655 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 TPK1Q9H3S4 243 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 UBQLN4Q9NRR5 601 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 SIRT3Q9NTG7 399 aaPredicted RBP12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 EXD2Q9NVH0 621 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 EMC3Q9P0I2 261 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 ICAM5Q9UMF0 924 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 USH1CQ9Y6N9 552 aa12.71□□□□□ -0.37
CTHRC1-201ENST00000330295 RNF103-CHMP3A0A140T963 221 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 TMEM129A0AVI4 362 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 PDLIM1O00151 329 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 POLR3GO15318 223 aaPredicted RBP12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC22A3O75751 556 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 KCNK2O95069 426 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 WNT11O96014 354 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 AK1P00568 194 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 IL6P05231 212 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 NGFRP08138 427 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 ADRA2AP08913 450 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 ACHEP22303 614 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 UQCRC2P22695 453 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC7A1P30825 629 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 CHI3L1P36222 383 aaPredicted RBP12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 MAP3K8P41279 467 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 NME5P56597 212 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 STX1BP61266 288 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC9A3R2Q15599 337 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 KLHL24Q6TFL4 600 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 C6orf120Q7Z4R8 191 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 SPATA21Q7Z572 469 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 C16orf58Q96GQ5 468 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 BEX1Q9HBH7 125 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 TESQ9UGI8 421 aaKnown RBP12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 DCTN4Q9UJW0 460 aa12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
CTHRC1-201ENST00000330295 IGKV3D-15A0A087WSY6 115 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 OXSR1O95747 527 aaPredicted RBP12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 IGKV1D-16P01601 117 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 NPR2P20594 1047 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 MATN1P21941 496 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 GATA3P23771 443 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 COL8A2P25067 703 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 TMEM33P57088 247 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 TXNL4AP83876 142 aaKnown RBP12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC9B1Q4ZJI4 515 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 PDCD4Q53EL6 469 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms