RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 C18orf21Q32NC0 220 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 GLYR1Q49A26 553 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TEX30Q5JUR7 227 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CTSL3PQ5NE16 218 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 VASNQ6EMK4 673 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ABLIM2Q6H8Q1 611 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 UBTD2Q8WUN7 234 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 C20orf24Q9BUV8 137 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 EXO1Q9UQ84 846 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 UBE2J1Q9Y385 318 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CSAG2Q9Y5P2 127 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 NPFFR2Q9Y5X5 522 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ATG2AQ2TAZ0 1938 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF726A6NNF4 738 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 KNG1P01042 644 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SLC10A3P09131 477 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 RFX2P48378 723 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 KCNJ10P78508 379 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SOWAHCQ53LP3 525 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 FAHD1Q6P587 224 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 FAM199XQ6PEV8 388 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 NXPE4Q6UWF7 544 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF619Q8N2I2 560 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OR1J1Q8NGS3 322 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SLC38A5Q8WUX1 472 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LINC01599Q8WXQ3 324 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CPNE4Q96A23 557 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 NPAS1Q99742 590 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SEMA4CQ9C0C4 833 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TAS2R5Q9NYW4 299 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SH3BGRL2Q9UJC5 107 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF337Q9Y3M9 751 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PRRC2CQ9Y520 2896 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LATO43561 262 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OR2T7P0C7T2 308 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CSNK2A1P68400 391 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SRPXP78539 464 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 RAB6CQ53S08 254 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 WDR88Q6ZMY6 472 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 MCEMP1Q8IX19 187 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CSNK2A3Q8NEV1 391 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OR2T27Q8NH04 317 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ABHD4Q8TB40 342 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 FAM213BQ8TBF2 198 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SLC12A9Q9BXP2 914 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 DPH1Q9BZG8 443 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 RAB6CQ9H0N0 254 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 C11orf49Q9H6J7 331 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 EGLN3Q9H6Z9 239 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CENPMQ9NSP4 180 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 C1orf226A1L170 272 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 DPM1O60762 260 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 UBE2IP63279 158 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OC90Q02509 493 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PDE7AQ13946 482 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF789Q5FWF6 425 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PSAPL1Q6NUJ1 521 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LEG1Q6P5S2 330 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 C15orf54Q8N8G6 183 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 IL17RCQ8NAC3 791 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 GPR78Q96P69 363 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 HIST1H2AAQ96QV6 131 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 WDR77Q9BQA1 342 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 STEAP1Q9UHE8 339 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PQLC2LA1A4F0 135 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 J3KTA2 159 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 DCTN6O00399 190 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 LGI1O95970 557 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 RPA2P15927 270 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 NDUFS1P28331 727 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CLDN6P56747 220 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PKIAP61925 76 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SLC7A9P82251 487 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 UPP1Q16831 310 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 Q6ZPB1 254 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PARGQ86W56 976 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 TEX19Q8NA77 164 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OR5D14Q8NGL3 314 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 ZC3HAV1LQ96H79 300 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CSF2RBP32927 897 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 HNF4GQ14541 408 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 MOGAT2Q3SYC2 334 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 OVCH2Q7RTZ1 564 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 GLCCI1Q86VQ1 547 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 MTMR14Q8NCE2 650 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 GHSRQ92847 366 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 CDS1Q92903 461 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PNPLA2Q96AD5 504 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SLC25A44Q96H78 314 aaPredicted RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 PDLIM5Q96HC4 596 aaKnown RBP6.58□□□□□ -1.36
SMC1A-201ENST00000322213 C2orf42Q9NWW7 574 aa6.58□□□□□ -1.36
SMC1A-201ENST00000322213 SYT5O00445 386 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 OR1D2P34982 312 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 HBG1P69891 147 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 HBG2P69892 147 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF273Q14593 569 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 RAB30Q15771 203 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ETFDHQ16134 617 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 PDZD11Q5EBL8 140 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms