RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 C3orf49Q96BT1 292 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 G6PC3Q9BUM1 346 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 GON7Q9BXV9 100 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 IRF2BPLQ9H1B7 796 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 NIPAL2Q9H841 368 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 PNO1Q9NRX1 252 aaKnown RBP15.93■□□□□ 0.14
COL9A1-201ENST00000320755 TMEM184BQ9Y519 407 aaPredicted RBP15.93■□□□□ 0.14
COL9A1-201ENST00000320755 OR5K4A6NMS3 321 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 PRR32B1ATL7 298 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 ERVH48-1M5A8F1 160 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 PRAMEF2O60811 474 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 TRIM3O75382 744 aaPredicted RBP15.93■□□□□ 0.14
COL9A1-201ENST00000320755 CDKN2AP42771 156 aaKnown RBP15.93■□□□□ 0.14
COL9A1-201ENST00000320755 MED25Q71SY5 747 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF321PQ8N8H1 164 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 OR11H7Q8NGC8 314 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 MOGAT1Q96PD6 335 aa15.93■□□□□ 0.14
COL9A1-201ENST00000320755 TVP23AA6NH52 213 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 UBL3O95164 117 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 OR8G3PP0DMU2 310 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 SRMP19623 302 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 NANOS3P60323 173 aaKnown RBP15.92■□□□□ 0.14
COL9A1-201ENST00000320755 SNTB2Q13425 540 aaKnown RBP15.92■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF141Q15928 474 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 RPL22L1Q6P5R6 122 aaKnown RBP15.92■□□□□ 0.14
COL9A1-201ENST00000320755 CMTM4Q8IZR5 234 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 POMGNT2Q8NAT1 580 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 MS4A3Q96HJ5 214 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 KLHDC3Q9BQ90 382 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 TWSG1Q9GZX9 223 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 A0A1B0GTH9 108 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 TMEM72A0PK05 275 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 STOMP27105 288 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 GPR3P46089 330 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 CD226Q15762 336 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 DPY19L2P2Q6ZN68 376 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 PLCZ1Q86YW0 608 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 OR14A16Q8NHC5 309 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 ALG12Q9BV10 488 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 NRIP3Q9NQ35 241 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF337Q9Y3M9 751 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 CABIN1Q9Y6J0 2220 aa15.92■□□□□ 0.14
COL9A1-201ENST00000320755 FAM221BA6H8Z2 402 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 C17orf51A8MQB3 221 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 PIN1P1O15428 100 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ALX3O95076 343 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 WNT1P04628 370 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 GRK6P43250 576 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 BTG1P62324 171 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 CDONQ4KMG0 1287 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.91■□□□□ 0.14
COL9A1-201ENST00000320755 OR8D2Q9GZM6 311 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 OR51J1Q9H342 316 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 STMN3Q9NZ72 180 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 SLC23A1Q9UHI7 598 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 TRAV1-2A0A0B4J238 106 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 CDC14CA4D256 554 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 TRABD2BA6NFA1 517 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ZFPL1O95159 310 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 CTXN1P60606 82 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 TNK1Q13470 666 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 FCRLAQ7L513 359 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 JAZF1Q86VZ6 243 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF687Q8N1G0 1237 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 OR8H1Q8NGG4 311 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 TGM7Q96PF1 710 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ELF4Q99607 663 aaPredicted RBP15.91■□□□□ 0.14
COL9A1-201ENST00000320755 GTPBP2Q9BX10 602 aaKnown RBP15.91■□□□□ 0.14
COL9A1-201ENST00000320755 TPSD1Q9BZJ3 242 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 FKRPQ9H9S5 495 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 NANSQ9NR45 359 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 MGAT4AQ9UM21 535 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 FLVCR2Q9UPI3 526 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 NPIPB9F8W1W9 429 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 OR7A10O76100 309 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 UCHL1P09936 223 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 CCDC58Q4VC31 144 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 PRSS58Q8IYP2 241 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 SYS1Q8N2H4 156 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 OR8K3Q8NH51 312 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 OR51Q1Q8NH59 317 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 KLHDC7BQ96G42 594 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 FOXN4Q96NZ1 517 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 LRRC61Q9BV99 259 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ABRACLQ9P1F3 81 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 ICAM5Q9UMF0 924 aa15.91■□□□□ 0.14
COL9A1-201ENST00000320755 TMA7Q9Y2S6 64 aaKnown RBP15.91■□□□□ 0.14
COL9A1-201ENST00000320755 EFCAB7A8K855 629 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 C17orf105B2RV13 164 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 GFERP55789 205 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 PITPNAQ00169 270 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 KCNAB1Q14722 419 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 PRTGQ2VWP7 1150 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 OR6C4Q8NGE1 309 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF431Q8TF32 576 aaPredicted RBP15.9■□□□□ 0.14
COL9A1-201ENST00000320755 ADAD1Q96M93 576 aaKnown RBP15.9■□□□□ 0.14
COL9A1-201ENST00000320755 NRSN2Q9GZP1 204 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 RXFP3Q9NSD7 469 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 IKZF2Q9UKS7 526 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 CLDN16Q9Y5I7 305 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms