RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 A8MXK9 166 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 ZGLP1P0C6A0 271 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 BMP7P18075 431 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 EEF1A1P68104 462 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 SEZ6L2Q6UXD5 910 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 SYT9Q86SS6 491 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 RBM18Q96H35 190 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 SPACA7Q96KW9 195 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 TIMP4Q99727 224 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 TEX12Q9BXU0 123 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 MMP17Q9ULZ9 603 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 A0A0G2JK05 382 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PRAMEF26H0Y7S4 382 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PLATP00750 562 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PAICSP22234 425 aaKnown RBP14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 FPR3P25089 353 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 EMDP50402 254 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 DECR1Q16698 335 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PRICKLE4Q2TBC4 344 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 AADACL4Q5VUY2 407 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PRSS58Q8IYP2 241 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 IZUMO1Q8IYV9 350 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 CD180Q99467 661 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 SAV1Q9H4B6 383 aaPredicted RBP14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 SYNDIG1Q9H7V2 258 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 CA10Q9NS85 328 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 SOHLH2Q9NX45 425 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 COPS3Q9UNS2 423 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 TRAPPC13A5PLN9 417 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 E9PI62 339 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 TNFRSF10CO14798 259 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 TNFSF14O43557 240 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 GMDSO60547 372 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 RGS9O75916 674 aaPredicted RBP14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 RABIFP47224 123 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 MTNR1BP49286 362 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 HCCSP53701 268 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 ETFDHQ16134 617 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PYHIN1Q6K0P9 492 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 BTN2A1Q7KYR7 527 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 OVCH2Q7RTZ1 564 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 PRSS27Q9BQR3 290 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 FBRSQ9HAH7 460 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 IL20Q9NYY1 176 aa14.28□□□□□ -0.12
SHROOM1-201ENST00000319854 UNC119BA6NIH7 251 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 NID1P14543 1247 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 FAM53BQ14153 422 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 CDRT4Q8N9R6 151 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 SMRP1Q8NCR6 262 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 OR52L1Q8NGH7 329 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 GCDHQ92947 438 aaPredicted RBP14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 BPIFA2Q96DR5 249 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF350Q9GZX5 532 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 AUNIPQ9H7T9 357 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 PIPOXQ9P0Z9 390 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 CA14Q9ULX7 337 aa14.27□□□□□ -0.12
SHROOM1-201ENST00000319854 SPTY2D1-AS1A0A0U1RR47 76 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 A0A1W2PPK0 400 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 LINC01387J3KSC0 135 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 OR5F1O95221 314 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 DUSP8Q13202 625 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 SAMD14Q8IZD0 417 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 TMEM99Q8N816 258 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 GPBAR1Q8TDU6 330 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 ANKRD9Q96BM1 317 aaPredicted RBP14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 KLHDC7BQ96G42 594 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 LMF1Q96S06 567 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 ZNF576Q9H609 170 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 POT1Q9NUX5 634 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 BAIAP2Q9UQB8 552 aa14.27□□□□□ -0.13
SHROOM1-201ENST00000319854 PLSCR5A0PG75 271 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 PPP1R3DO95685 299 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 CBX7O95931 251 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 TFP02787 698 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 STAT5AP42229 794 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 CCR4P51679 360 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 FXYD6P3P58550 94 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 YPEL5P62699 121 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 CCINQ13939 588 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 KCNAB1Q14722 419 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 PRAMEF17Q5VTA0 474 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 RPTNQ6XPR3 784 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 FGD2Q7Z6J4 655 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 MRGPREQ86SM8 312 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 MCATQ8IVS2 390 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 LMX1AQ8TE12 382 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 MMABQ96EY8 250 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 TGM7Q96PF1 710 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 NPAS1Q99742 590 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 GPR160Q9UJ42 338 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 OR10H1Q9Y4A9 318 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 IRGMA1A4Y4 181 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 TRABD2BA6NFA1 517 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 TGFBR3LH3BV60 316 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 DBIP07108 87 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 MYF5P13349 255 aa14.26□□□□□ -0.13
SHROOM1-201ENST00000319854 ARHGDIBP52566 201 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms