RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ARSGQ96EG1 525 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 ZC3HAV1LQ96H79 300 aaKnown RBP12.96□□□□□ -0.34
VRK3-201ENST00000316763 OR2B2Q9GZK3 357 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 DDX28Q9NUL7 540 aaKnown RBP12.96□□□□□ -0.34
VRK3-201ENST00000316763 MALT1Q9UDY8 824 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 PRODH2Q9UF12 536 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 RARRES3Q9UL19 164 aa12.96□□□□□ -0.34
VRK3-201ENST00000316763 KIF26BQ2KJY2 2108 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 SERINC4A6NH21 518 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 SERPINA3P01011 423 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 IFNA16P05015 189 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 MAOAP21397 527 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 GALNSP34059 522 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 PGDP52209 483 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 NRG3P56975 720 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 ACTA2P62736 377 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 ACTG2P63267 376 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 ZNF85Q03923 595 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 SLC3A1Q07837 685 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 FUT7Q11130 342 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 SERTAD2Q14140 314 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 PWWP2BQ6NUJ5 590 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 CEACAM19Q7Z692 300 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 BPHLQ86WA6 291 aaPredicted RBP12.95□□□□□ -0.34
VRK3-201ENST00000316763 LRRC28Q86X40 367 aaPredicted RBP12.95□□□□□ -0.34
VRK3-201ENST00000316763 POMGNT2Q8NAT1 580 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 ABHD4Q8TB40 342 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 TP53INP1Q96A56 240 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 SENP5Q96HI0 755 aaPredicted RBP12.95□□□□□ -0.34
VRK3-201ENST00000316763 TMEM43Q9BTV4 400 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 OR10A5Q9H207 317 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 RBFOX1Q9NWB1 397 aaKnown RBP12.95□□□□□ -0.34
VRK3-201ENST00000316763 CHRNA9Q9UGM1 479 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 ICAM5Q9UMF0 924 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 ERVK-19Q9WJR5 959 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
VRK3-201ENST00000316763 A0A087WUJ7 227 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 OR2W5A6NFC9 320 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 HRKO00198 91 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 AGRPO00253 132 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 IDH3BO43837 385 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 ADAM11O75078 769 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 TIAF1O95411 115 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 OR2T7P0C7T2 308 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 CLUP10909 449 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 FBLP22087 321 aaKnown RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 SHC1P29353 583 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 NR4A2P43354 598 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 KIR2DL3P43628 341 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 NKX2-5P52952 324 aaPredicted RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 MADCAM1Q13477 382 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 FHL1Q13642 323 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 P2RY14Q15391 338 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.94□□□□□ -0.34
VRK3-201ENST00000316763 TBRG1Q3YBR2 411 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 ZFP69Q49AA0 526 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 CDCP2Q5VXM1 449 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 FAAH2Q6GMR7 532 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 BCORP1Q8N888 145 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 BMPERQ8N8U9 685 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 TEX19Q8NA77 164 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 SLC38A9Q8NBW4 561 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 OR2T27Q8NH04 317 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 C16orf52Q8NHV5 167 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 UBL7Q96S82 380 aaPredicted RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 CCNL2Q96S94 520 aaPredicted RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 CNN2Q99439 309 aaKnown RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 TTYH2Q9BSA4 534 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 MARCH7Q9H992 704 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 OCIAD1Q9NX40 245 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 EXTL2Q9UBQ6 330 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 DTX4Q9Y2E6 619 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 IER3IP1Q9Y5U9 82 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 IGKV3D-11A0A0A0MRZ8 115 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 E9PI62 339 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 LYRM1O43325 122 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 ONECUT2O95948 504 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 CT45A8P0DMV1 189 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 CT45A9P0DMV2 189 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 FGF5P12034 268 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 RPL4P36578 427 aaKnown RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 GBX2P52951 348 aaPredicted RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 OR12D2P58182 307 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 IL11RAQ14626 422 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
VRK3-201ENST00000316763 CT45A2Q5DJT8 189 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 C1orf189Q5VU69 101 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 DMKNQ6E0U4 476 aaPredicted RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 AGBL5Q8NDL9 886 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 NLGN4YQ8NFZ3 816 aaPredicted RBP12.94□□□□□ -0.34
VRK3-201ENST00000316763 OR4K13Q8NH42 304 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 OIT3Q8WWZ8 545 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 SNX18Q96RF0 628 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 SLC19A3Q9BZV2 496 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 SLC22A11Q9NSA0 550 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 ZMIZ1Q9ULJ6 1067 aa12.94□□□□□ -0.34
VRK3-201ENST00000316763 ZNF337Q9Y3M9 751 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms