RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PROS1P07225 676 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 ADRB1P08588 477 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 PRR23D2P0DMB1 279 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 SAGP10523 405 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 ST6GAL1P15907 406 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 PSMB1P20618 241 aaKnown RBP15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 MC3RP41968 323 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 CCR9P51686 369 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 FXYD6P3P58550 94 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 FCRLBQ6BAA4 426 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 RGS7BPQ6MZT1 257 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 ALKAL2Q6UX46 152 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 ARL14Q8N4G2 192 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 LGALS14Q8TCE9 139 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 PIPOXQ9P0Z9 390 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 AK6Q9Y3D8 172 aaKnown RBP15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 SCN2AQ99250 2005 aa15.78■□□□□ 0.12
SCAMP4-201ENST00000316097 PLSCR5A0PG75 271 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 FLRT2O43155 660 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 TNFSF14O43557 240 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 GSTZ1O43708 216 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 ZIC2O95409 532 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 FCER2P06734 321 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 NMBP08949 121 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 SLC35G6P0C7Q6 338 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 CLUP10909 449 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 PRG2P13727 222 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 RAD52P43351 418 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 CXCL12P48061 93 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 TAS2R43P59537 309 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 METTL11BQ5VVY1 283 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 OR5T3Q8NGG3 340 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 OR56A1Q8NGH5 318 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 SFXN5Q8TD22 340 aa15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 WDR89Q96FK6 387 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 FBXO9Q9UK97 447 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-201ENST00000316097 UNC119BA6NIH7 251 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 K7ESF4 209 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 PRAF2O60831 178 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 ID2Q02363 134 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF85Q03923 595 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 SRSF5Q13243 272 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 RUNX2Q13950 521 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 PRAMEF8Q5VWM4 474 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 PRAMEF7Q5VXH5 474 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 NUP43Q8NFH3 380 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 PTP4A1Q93096 173 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 TM4SF19Q96DZ7 209 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 TEAD3Q99594 435 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 FN3KQ9H479 309 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 NPDC1Q9NQX5 325 aaPredicted RBP15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 ZNF69Q9UC07 566 aa15.77■□□□□ 0.11
SCAMP4-201ENST00000316097 TCRBV16S1A1N1A0A5B0 115 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 STX11O75558 287 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 OR5F1O95221 314 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 LPLP06858 475 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 NME1P15531 152 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 BMP7P18075 431 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 NOS3P29474 1203 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 PDX1P52945 283 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 PRR5P85299 388 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 MAPK14Q16539 360 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 FAM69AQ5T7M9 428 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 DMKNQ6E0U4 476 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 OVCH2Q7RTZ1 564 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 C1orf216Q8TAB5 229 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 BAHD1Q8TBE0 780 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 COL26A1Q96A83 441 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 ZFYVE21Q9BQ24 234 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 SYNDIG1LA6NDD5 238 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 PCP4L1A6NKN8 68 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 SLC22A31A6NKX4 558 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 OR5K4A6NMS3 321 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 BHLHE40O14503 412 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 SBK2P0C263 348 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 NFYAP23511 347 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 PRKAR1BP31321 381 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 NRG3P56975 720 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 LTB4RQ15722 352 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 NKAIN2Q5VXU1 208 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 OR5M10Q6IEU7 315 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 SSX6Q7RTT6 188 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 CMTM4Q8IZR5 234 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 MEIOBQ8N635 442 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 FAM98AQ8NCA5 519 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 PFN4Q8NHR9 129 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 BRIX1Q8TDN6 353 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 INPP5EQ9NRR6 644 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 RABL2AQ9UBK7 228 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 PFDN2Q9UHV9 154 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 CES1P1Q9UKY3 287 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 BAIAP2Q9UQB8 552 aa15.76■□□□□ 0.11
SCAMP4-201ENST00000316097 SPTBP11277 2137 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 A0A1B0GUH1 482 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 KRBOX1C9JBD0 128 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 MAGEB4O15481 346 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 TRA2BP62995 288 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 RIPPLY1Q0D2K3 151 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 BAIAP2L2Q6UXY1 529 aa15.75■□□□□ 0.11
SCAMP4-201ENST00000316097 TFAP2EQ6VUC0 442 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms