RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ALOX12BO75342 701 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 PTHLHP12272 177 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 CCL4P13236 92 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 MAP3K8P41279 467 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 ACAA2P42765 397 aaKnown RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 HSD17B7P56937 341 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 ZXDAP98168 799 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 SIGLEC14Q08ET2 396 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 TSPAN31Q12999 210 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 MAB21L1Q13394 359 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 MEDAGQ5VYS4 303 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 BICRALQ6AI39 1079 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 LYPD4Q6UWN0 246 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 MBOAT2Q6ZWT7 520 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 CHMP1BQ7LBR1 199 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 OAFQ86UD1 273 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 C9orf62Q8N4C0 152 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 CLDN22Q8N7P3 220 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM105Q8N8V8 129 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 STT3BQ8TCJ2 826 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF431Q8TF32 576 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 HSD17B8Q92506 261 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM43Q9BTV4 400 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 UBQLN3Q9H347 655 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 FN3KQ9H479 309 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 ENAMQ9NRM1 1142 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 DNAJB12Q9NXW2 375 aaKnown RBP6.96□□□□□ -1.3
TRIM55-202ENST00000315962 GSTK1Q9Y2Q3 226 aa6.96□□□□□ -1.3
TRIM55-202ENST00000315962 LY6G6EA0A0G2JKS1 128 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 IGHV5-10-1A0A0J9YXX1 117 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 PMS2P1A4D2B8 440 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 PSMD9O00233 223 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 SYT5O00445 386 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 HCRTR2O43614 444 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF354AO60765 605 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ICOSLGO75144 302 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 SCRG1O75711 98 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 AGR2O95994 175 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 C1QBP02746 253 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 MT-ND4P03905 459 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 CLPSP04118 112 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 PRKACBP22694 351 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF81P51508 661 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 SKP1P63208 163 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 CDK5Q00535 292 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 SLC25A35Q3KQZ1 300 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 C1QL3Q5VWW1 255 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 VASNQ6EMK4 673 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 FAAP20Q6NZ36 180 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 MZT2BQ6NZ67 158 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 C9orf40Q8IXQ3 194 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 D2HGDHQ8N465 521 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM99Q8N816 258 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 OR4D9Q8NGE8 314 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 FANK1Q8TC84 345 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 AKAP1Q92667 903 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 STACQ99469 402 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 MED28Q9H204 178 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM27Q9HBJ8 222 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF224Q9NZL3 707 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 RASD1Q9Y272 281 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 U3KQA8 63 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 HEATR5AQ86XA9 2040 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 SPENQ96T58 3664 aaKnown RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ORC5O43913 435 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 GATBO75879 557 aaKnown RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 PPP1R3DO95685 299 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF28P17035 718 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 GIFP27352 417 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 GRPRP30550 384 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 MAGEB1P43366 347 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 EVX1P49640 407 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 CLDN20P56880 219 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 E2F1Q01094 437 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM201Q5SNT2 666 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF620Q6ZNG0 422 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 RFLNBQ8N5W9 214 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 OR10H4Q8NGA5 316 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 OR4K13Q8NH42 304 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 LRRC20Q8TCA0 184 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 GNPDA2Q8TDQ7 276 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 CCDC74BQ96LY2 380 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 FOXN4Q96NZ1 517 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 CD180Q99467 661 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 NPAS1Q99742 590 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 GON7Q9BXV9 100 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 POLDIP3Q9BY77 421 aaKnown RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 HINT3Q9NQE9 182 aaKnown RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 RXFP3Q9NSD7 469 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 EPHA6Q9UF33 1036 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 PPIEQ9UNP9 301 aaKnown RBP6.95□□□□□ -1.3
TRIM55-202ENST00000315962 FLVCR2Q9UPI3 526 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 MGAQ8IWI9 3026 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 GVINP1Q7Z2Y8 2422 aa6.95□□□□□ -1.3
TRIM55-202ENST00000315962 A0A1B0GX78 115 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms