RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ARL5BQ96KC2 179 aa16.6■□□□□ 0.25
SPSB4-201ENST00000310546 ADGRL4Q9HBW9 690 aa16.6■□□□□ 0.25
SPSB4-201ENST00000310546 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
SPSB4-201ENST00000310546 FOXJ3Q9UPW0 622 aa16.6■□□□□ 0.25
SPSB4-201ENST00000310546 LINC01553A4QN01 128 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 TMPRSS11DO60235 418 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 IL9P15248 144 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 DECR1Q16698 335 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 JMJD6Q6NYC1 403 aaPredicted RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 FAM122BQ7Z309 247 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ARL14Q8N4G2 192 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 EID2Q8N6I1 236 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 MRPL43Q8N983 215 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 OR4C16Q8NGL9 310 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ELP5Q8TE02 316 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 EDARADDQ8WWZ3 215 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 FAM117AQ9C073 453 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 BCL2L10Q9HD36 194 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 PRMT8Q9NR22 394 aaPredicted RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 MEIS3P1A6NDR6 274 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ICOSLGO75144 302 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 POP7O75817 140 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 S100A8P05109 93 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 TMIGD3P0DMS9 266 aaPredicted RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 MECP2P51608 486 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 DCDP81605 110 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 OVCH1Q7RTY7 1134 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 HSD11B1LQ7Z5J1 315 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 GJD3Q8N144 294 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 SETD7Q8WTS6 366 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 SMIM19Q96E16 107 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 VRK1Q99986 396 aaPredicted RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 C1QTNF2Q9BXJ5 285 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 TREM1Q9NP99 234 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 INPP5EQ9NRR6 644 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ANKRD10Q9NXR5 420 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 WNT6Q9Y6F9 365 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 A0A0D9SG52 128 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 SYT5O00445 386 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ZNF749O43361 778 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 FADS1O60427 444 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ACTL6AO96019 429 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 PTAFRP25105 342 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 DPP4P27487 766 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 HTR2AP28223 471 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 CD96P40200 585 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 RAB5BP61020 215 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 AGERQ15109 404 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 KHDRBS2Q5VWX1 349 aaKnown RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 LILRA6Q6PI73 481 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 TMEM220Q6QAJ8 160 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ZSCAN1Q8NBB4 408 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 OR51L1Q8NGJ5 315 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 OR51S1Q8NGJ8 323 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 WDR34Q96EX3 536 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 GFI1Q99684 422 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 EXO5Q9H790 373 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 ACSS1Q9NUB1 689 aaPredicted RBP16.59■□□□□ 0.25
SPSB4-201ENST00000310546 PLAGL1Q9UM63 463 aa16.59■□□□□ 0.25
SPSB4-201ENST00000310546 FAM86C2PA6NEL3 165 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 KLF4O43474 513 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 HTR3BO95264 441 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 TBX6O95947 436 aaPredicted RBP16.58■□□□□ 0.24
SPSB4-201ENST00000310546 PSMB10P40306 273 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 CENPAP49450 140 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 FXYD6P3P58550 94 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 RPS11P62280 158 aaKnown RBP eCLIP16.58■□□□□ 0.24
SPSB4-201ENST00000310546 PPP2CBP62714 309 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 PPP2CAP67775 309 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 TGM3Q08188 693 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 TAF13Q15543 124 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 ZNF750Q32MQ0 723 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 AKIRIN2Q53H80 203 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 USP53Q70EK8 1073 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 PGAP1Q75T13 922 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 AMER3Q8N944 861 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 DMBX1Q8NFW5 382 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 PELI1Q96FA3 418 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 CPNE2Q96FN4 548 aaPredicted RBP16.58■□□□□ 0.24
SPSB4-201ENST00000310546 BBS4Q96RK4 519 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 SYNPO2LQ9H987 977 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 IL21RQ9HBE5 538 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 GHRLQ9UBU3 117 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 ASF1AQ9Y294 204 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 SLC5A10A0PJK1 596 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 ZNF705EA8MWA4 302 aaPredicted RBP16.58■□□□□ 0.24
SPSB4-201ENST00000310546 LEFTY2O00292 366 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 TXNL1O43396 289 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 FAUP35544 74 aaKnown RBP16.58■□□□□ 0.24
SPSB4-201ENST00000310546 BSGP35613 385 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 SNRPD1P62314 119 aaKnown RBP16.58■□□□□ 0.24
SPSB4-201ENST00000310546 UNQ6126/PRO20091Q6UXV3 157 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 CACUL1Q86Y37 369 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 KLHDC8AQ8IYD2 350 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 OR8S1Q8NH09 359 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 PAQR8Q8TEZ7 354 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 OTUB2Q96DC9 234 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 AMDHD1Q96NU7 426 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms