RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 VDAC3Q9Y277 283 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 PCDHGB6Q9Y5F9 930 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 NPFFR2Q9Y5X5 522 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 A0A1W2PRG6 482 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 ALG1L2C9J202 215 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 BOLA2-SMG1P6H3BVE0 249 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 MEN1O00255 615 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 PNMTP11086 282 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SPNP16150 400 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 PNLIPP16233 465 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SPI1P17947 270 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 DCAF7P61962 342 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 QPRTQ15274 297 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 ZSWIM7Q19AV6 140 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 SYT9Q86SS6 491 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 CCDC190Q86UF4 302 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 OR8H2Q8N162 312 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 NFAM1Q8NET5 270 aaPredicted RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 WDR77Q9BQA1 342 aaPredicted RBP10.35□□□□□ -0.75
SCG2-201ENST00000305409 SLC30A2Q9BRI3 323 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 MROQ9BYG7 248 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 MED11Q9P086 117 aa10.35□□□□□ -0.75
SCG2-201ENST00000305409 FUOMA2VDF0 154 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TVP23AA6NH52 213 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 H3BSH0 61 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 IL11P20809 199 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 SHC1P29353 583 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 RPS4XP62701 263 aaKnown RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 COL28A1Q2UY09 1125 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 LINC00299Q6ZSB3 139 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 OVCH1Q7RTY7 1134 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 C17orf50Q8WW18 174 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 ORAI1Q96D31 301 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 SPSB2Q99619 263 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 ADAM19Q9H013 955 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 MIXL1Q9H2W2 232 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 EVA1AQ9H8M9 152 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 ENAMQ9NRM1 1142 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 BAIAP2Q9UQB8 552 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 GSTK1Q9Y2Q3 226 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TRDV1A0A1B0GX56 115 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TMEM200CA6NKL6 621 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TO15178 435 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 FADS1O60427 444 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 CPNE3O75131 537 aaKnown RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 ASAH2BP0C7U1 165 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 GP1BBP13224 206 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 NAT1P18440 290 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TGM1P22735 817 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 MAGEB1P43366 347 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 PON3Q15166 354 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 YOD1Q5VVQ6 348 aaPredicted RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 ZNF385CQ66K41 422 aaPredicted RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 ARSKQ6UWY0 536 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 NANOGNBQ7Z5D8 188 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 NR2C2APQ86WQ0 139 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 FAM181AQ8N9Y4 354 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 GPR119Q8TDV5 335 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 NAT6Q93015 286 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 TGIF2Q9GZN2 237 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 EXOSC3Q9NQT5 275 aaKnown RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 CRNNQ9UBG3 495 aaPredicted RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 ING1Q9UK53 422 aaPredicted RBP10.34□□□□□ -0.75
SCG2-201ENST00000305409 A3GALT2U3KPV4 340 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 ADAMTS20P59510 1910 aa10.34□□□□□ -0.75
SCG2-201ENST00000305409 IGLV3-12A0A075B6K2 115 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 TMEM72A0PK05 275 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 SAGE2PA6NJ88 616 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 PRR32B1ATL7 298 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 TAF4O00268 1085 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 SUSD5O60279 629 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 IL1AP01583 271 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 MT-ND5P03915 603 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 HLA-DPB1P04440 258 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 HNRNPCP07910 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCG2-201ENST00000305409 ANKRD34CP0C6C1 535 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 PNLIPRP2P54317 469 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 PSPHP78330 225 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 CD200R1LQ6Q8B3 271 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 IL20RBQ6UXL0 311 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 JAZF1Q86VZ6 243 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 SLC35F2Q8IXU6 374 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 DDOQ99489 341 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 TRIM36Q9NQ86 728 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 ACOXLQ9NUZ1 547 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 GNG8Q9UK08 70 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 CMAHPQ9Y471 501 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 A0A075B6Q4 140 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 TMED7-TICAM2A0A0A6YYA0 188 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 A0A1B0GVC2 190 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 PMS2P1A4D2B8 440 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 A6NIN4 97 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 D6RAR5 112 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 ADAM10O14672 748 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 SLC25A12O75746 678 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 OR2J2O76002 312 aa10.33□□□□□ -0.76
SCG2-201ENST00000305409 DLGAP3O95886 979 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms