RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 TBX5Q99593 518 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 KLHDC3Q9BQ90 382 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 TMED9Q9BVK6 235 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 APMAPQ9HDC9 416 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 PLEKHB1Q9UF11 243 aaPredicted RBP17.65■□□□□ 0.42
HOXC4-201ENST00000303406 ZMIZ1Q9ULJ6 1067 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 CMAHPQ9Y471 501 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 PCDHGB2Q9Y5G2 931 aa17.65■□□□□ 0.42
HOXC4-201ENST00000303406 TEX13CA0A0J9YWL9 993 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 TRBV11-1A0A0K0K1C0 115 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 A0A1W2PQL4 384 aaPredicted RBP17.64■□□□□ 0.41
HOXC4-201ENST00000303406 OR6C68A6NDL8 312 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 ANKUB1A6NFN9 424 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 A8MVM7 634 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 BLOC1S5-TXNDC5H3BN57 136 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 MAGEB3O15480 346 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 SCO2O43819 266 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 SLC25A12O75746 678 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 ZFAND5O76080 213 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 TFP02787 698 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 GYPBP06028 91 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 MC2RQ01718 297 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 RPL18Q07020 188 aaKnown RBP17.64■□□□□ 0.41
HOXC4-201ENST00000303406 C17orf67Q0P5P2 114 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 TOMM34Q15785 309 aaPredicted RBP17.64■□□□□ 0.41
HOXC4-201ENST00000303406 CDONQ4KMG0 1287 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 MAMDC2Q7Z304 686 aaPredicted RBP17.64■□□□□ 0.41
HOXC4-201ENST00000303406 LYSMD2Q8IV50 215 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 TMEM105Q8N8V8 129 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 OR2I1PQ8NGU4 316 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 RASD2Q96D21 266 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 ZMYND19Q96E35 227 aaPredicted RBP17.64■□□□□ 0.41
HOXC4-201ENST00000303406 C4orf36Q96KX1 117 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 SP140LQ9H930 580 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 KLHL1Q9NR64 748 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 ETAA1Q9NY74 926 aa17.64■□□□□ 0.41
HOXC4-201ENST00000303406 LOC102723996A0A087X1L8 192 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 TMED7-TICAM2A0A0A6YYA0 188 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 TMEM200CA6NKL6 621 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 CLEC2LP0C7M8 214 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 MTNR1BP49286 362 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 TMED10P49755 219 aaKnown RBP17.63■□□□□ 0.41
HOXC4-201ENST00000303406 KRR1Q13601 381 aaKnown RBP17.63■□□□□ 0.41
HOXC4-201ENST00000303406 DMKNQ6E0U4 476 aaPredicted RBP17.63■□□□□ 0.41
HOXC4-201ENST00000303406 LEG1Q6P5S2 330 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 TMEM91Q6ZNR0 172 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 ZBTB44Q8NCP5 570 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 LSM14AQ8ND56 463 aaKnown RBP17.63■□□□□ 0.41
HOXC4-201ENST00000303406 NEIL3Q8TAT5 605 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 ASB15Q8WXK1 588 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 Q96M85 177 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 PTDSS2Q9BVG9 487 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 TMED7Q9Y3B3 224 aa17.63■□□□□ 0.41
HOXC4-201ENST00000303406 SIRT4Q9Y6E7 314 aaPredicted RBP17.63■□□□□ 0.41
HOXC4-201ENST00000303406 CASKO14936 926 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 OGG1O15527 345 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 LRRTM2O43300 516 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 SUSD5O60279 629 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 NUDT14O95848 222 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 MSX1P28360 303 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 MXD1Q05195 221 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 CDC20Q12834 499 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 SGCBQ16585 318 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 GXYLT1Q4G148 440 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 FAM69AQ5T7M9 428 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 LINC01590Q5TEZ4 76 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 DBX2Q6ZNG2 339 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ADGRG3Q86Y34 549 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 MS4A15Q8N5U1 240 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 SYT14Q8NB59 555 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 HAVCR2Q8TDQ0 301 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ABTB1Q969K4 478 aaPredicted RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 MNTQ99583 582 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 HDHD5Q9BXW7 423 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 RXFP3Q9NSD7 469 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 RYDENQ9NUL5 291 aaKnown RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 GRHPRQ9UBQ7 328 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 IGLV3-32A0A0A0MS00 114 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 TMEM72A0PK05 275 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 TMEM221A6NGB7 291 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 J3QLW9 94 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 M0R296 226 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ETV2O00321 342 aaPredicted RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 KHNYNO15037 678 aaKnown RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 TBX1O43435 398 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 OR2T1O43869 369 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ZNF19P17023 458 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ACP1P24666 158 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 CDKN2AP42771 156 aaKnown RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 MAP2K6P52564 334 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 GBX2P52951 348 aaPredicted RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 FOXL2P58012 376 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 COL28A1Q2UY09 1125 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 CCDC58Q4VC31 144 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 DDI2Q5TDH0 399 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 LCN10Q6JVE6 187 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 PAMR1Q6UXH9 720 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 TEX19Q8NA77 164 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 OR5J2Q8NH18 312 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms