RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 HCRTR2O43614 444 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ZNF354AO60765 605 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 IGKV3-11P04433 115 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 MYL9P24844 172 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 MTNR1BP49286 362 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ARL4DP49703 201 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 CTXN1P60606 82 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 CD83Q01151 205 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 PON3Q15166 354 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ZNF74Q16587 644 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 LCN1P1Q5VSP4 162 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ZNF57Q68EA5 555 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 TRILQ7L0X0 811 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SLC38A9Q8NBW4 561 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 LSM14AQ8ND56 463 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 ZNF563Q8TA94 476 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 PMM1Q92871 262 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 GFM1Q96RP9 751 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 NKX3-1Q99801 234 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 TMEM43Q9BTV4 400 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 TSPAN10Q9H1Z9 355 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 DDX28Q9NUL7 540 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 MKL2Q9ULH7 1088 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 MRPS7Q9Y2R9 242 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 IGKV3D-11A0A0A0MRZ8 115 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 TRBV2A0A0J9YWF9 115 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 C11orf98E9PRG8 122 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 H0YIG0 161 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SCDO00767 359 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SCO2O43819 266 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 GDF9O60383 454 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 NUDT14O95848 222 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 EDNRAP25101 427 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ITPKBP27987 946 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 DDOSTP39656 456 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 DIO1P49895 249 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 CLDN12P56749 244 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 RPS4XP62701 263 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 BDH1Q02338 343 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 KRR1Q13601 381 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 HBMQ6B0K9 141 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 OGFOD3Q6PK18 319 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 DPY19L2P2Q6ZN68 376 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 PXKQ7Z7A4 578 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 RDH10Q8IZV5 341 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 C19orf18Q8NEA5 215 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 FAM71CQ8NEG0 241 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 TRMT10AQ8TBZ6 339 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 SLC35B4Q969S0 331 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ZDHHC12Q96GR4 267 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 DERL3Q96Q80 235 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 DUSP15Q9H1R2 295 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 KCNN2Q9H2S1 579 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 MMP25Q9NPA2 562 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 NANSQ9NR45 359 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 HAO2Q9NYQ3 351 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ZNF337Q9Y3M9 751 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 TMEM72A0PK05 275 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SMLR1H3BR10 107 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 PIN1P1O15428 100 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ZNF264O43296 627 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 TIAF1O95411 115 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 IL33O95760 270 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 IFI6P09912 130 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 GSTT2P0CG29 244 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 GSTT2BP0CG30 244 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 FAM157BP0CG42 384 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 PPICP45877 212 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 MAP2K3P46734 347 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SKP1P63208 163 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SIRPAP78324 504 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 HSD11B2P80365 405 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 RPL18Q07020 188 aaKnown RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 CDK5R1Q15078 307 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 CEP78Q5JTW2 689 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 TCTE1Q5JU00 501 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 PRSS45Q7RTY3 260 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ENKURQ8TC29 256 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 RGP1Q92546 391 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 LCORQ96JN0 433 aaPredicted RBP10.72□□□□□ -0.69
RHO-201ENST00000296271 GFI1Q99684 422 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 COQ7Q99807 217 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 DPYSL5Q9BPU6 564 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 ALG12Q9BV10 488 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 VN1R1Q9GZP7 353 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 RNF121Q9H920 327 aa10.72□□□□□ -0.69
RHO-201ENST00000296271 SEC14L5O43304 696 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 EEF1E1O43324 174 aaKnown RBP10.71□□□□□ -0.69
RHO-201ENST00000296271 LYRM1O43325 122 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 CDC40O60508 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
RHO-201ENST00000296271 CPNE3O75131 537 aaKnown RBP10.71□□□□□ -0.69
RHO-201ENST00000296271 NRG3P56975 720 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 EBPQ15125 230 aaKnown RBP10.71□□□□□ -0.69
RHO-201ENST00000296271 ALG10Q5BKT4 473 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 WBP2NLQ6ICG8 309 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 ZNF544Q6NX49 715 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 FAM122BQ7Z309 247 aa10.71□□□□□ -0.69
RHO-201ENST00000296271 KDM8Q8N371 416 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms