RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HTR2AP28223 471 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 PKLRP30613 574 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 LIM2P55344 173 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 CTXN1P60606 82 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 SPEM2Q0P670 501 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 PRAMEF8Q5VWM4 474 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 PRAMEF7Q5VXH5 474 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 C17orf107Q6ZR85 190 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 KCTD20Q7Z5Y7 419 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 CD163Q86VB7 1156 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 NR4A3Q92570 626 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 ANKRD10Q9NXR5 420 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 B3GNT2Q9NY97 397 aa12.45□□□□□ -0.42
HPS3-201ENST00000296051 CDHR4A6H8M9 788 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 LGALS8O00214 317 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 DOK2O60496 412 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 RRADP55042 308 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 ACTA2P62736 377 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 ACTG2P63267 376 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 DCDP81605 110 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 ARHGAP11AQ6P4F7 1023 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 METAP1DQ6UB28 335 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 BRIX1Q8TDN6 353 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 TCTN2Q96GX1 697 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 HDAC8Q9BY41 377 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 TMEM38AQ9H6F2 299 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 NFYAP23511 347 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 IL32P24001 234 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 FRKP42685 505 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 GPR143P51810 404 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 DLX5P56178 289 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 SNRPGP62308 76 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 ZP2Q05996 745 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 GPR50Q13585 617 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 TSC22D1Q15714 1073 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 RNASE10Q5GAN6 216 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 TMEM196Q5HYL7 178 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 KRBOX4Q5JUW0 171 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 KIAA0907Q7Z7F0 614 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 ADGRF3Q8IZF5 1079 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 CDRT4Q8N9R6 151 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 EID2BQ96D98 161 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 C1QTNF2Q9BXJ5 285 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 NRAPQ86VF7 1730 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 LOXHD1Q8IVV2 1947 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 TEX13DA0A0J9YY54 714 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 PLPP1O14494 284 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 RAB3DO95716 219 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 UGT2B7P16662 529 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 EVX1P49640 407 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 FAM71E1Q6IPT2 247 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 RAB11FIP2Q7L804 512 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 GPR155Q7Z3F1 870 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 OR5AK2Q8NH90 309 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 FAM46BQ96A09 425 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 PPM1DO15297 605 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 OR8G3PP0DMU2 310 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 HIST1H1TP22492 207 aaPredicted RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 TEAD1P28347 426 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 CD34P28906 385 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 EXOSC2Q13868 293 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 SLC35F2Q8IXU6 374 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 C19orf47Q8N9M1 422 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 ZBTB44Q8NCP5 570 aa12.44□□□□□ -0.42
HPS3-201ENST00000296051 HINT3Q9NQE9 182 aaKnown RBP12.44□□□□□ -0.42
HPS3-201ENST00000296051 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 PPM1BO75688 479 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 H2BFMP0C1H6 154 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 ANXA7P20073 488 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 SLC6A12P48065 614 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 FAM122CQ6P4D5 195 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 OPN5Q6U736 354 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 SLC16A11Q8NCK7 471 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 OR51Q1Q8NH59 317 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 DVL3Q92997 716 aaPredicted RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 TM4SF18Q96CE8 201 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 NEURL3Q96EH8 262 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 METTL2AQ96IZ6 378 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 TNFRSF13CQ96RJ3 184 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 UBQLN3Q9H347 655 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 FN3KQ9H479 309 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 V9GY05 133 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 SULT2B1O00204 365 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 CASC3O15234 703 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 FUT1P19526 365 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 TLE3Q04726 772 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 C14orf28Q4W4Y0 310 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 SMUG1Q53HV7 270 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 YOD1Q5VVQ6 348 aaPredicted RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 GLT8D1Q68CQ7 371 aa12.43□□□□□ -0.42
HPS3-201ENST00000296051 FIP1L1Q6UN15 594 aaKnown RBP12.43□□□□□ -0.42
HPS3-201ENST00000296051 ZFPM2Q8WW38 1151 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms