RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 CSNK1G3Q9Y6M4 447 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 KCNK5O95279 499 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 HNRNPA1P09651 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL6A3-201ENST00000295550 PSMB10P40306 273 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 AKR1C1Q04828 323 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 DLX2Q07687 328 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-201ENST00000295550 STK11Q15831 433 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 ACTBL2Q562R1 376 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 NADSYN1Q6IA69 706 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 CBLL1Q75N03 491 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 MEX3DQ86XN8 651 aaKnown RBP9.21□□□□□ -0.94
COL6A3-201ENST00000295550 LGALS14Q8TCE9 139 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 DUSP19Q8WTR2 217 aa9.21□□□□□ -0.94
COL6A3-201ENST00000295550 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 P2RX1P51575 399 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 MZT1Q08AG7 82 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 LYPD4Q6UWN0 246 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 C10orf90Q96M02 699 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 MRPL22Q9NWU5 206 aaKnown RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ASIC5Q9NY37 505 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 IGLV3-10A0A075B6K4 115 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 FZD7O75084 574 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 IL1AP01583 271 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 MOB1BQ7L9L4 216 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 MRPL21Q7Z2W9 205 aaKnown RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 NRARPQ7Z6K4 114 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 NAA40Q86UY6 237 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 HCAR1Q9BXC0 346 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 RCE1Q9Y256 329 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 M0R3H8 397 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ADAM12O43184 909 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 GPR37L1O60883 481 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 OR6F1Q8NGZ6 308 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 OR8U1Q8NH10 309 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 LCATP04180 440 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 PKLRP30613 574 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 TMEM31Q5JXX7 168 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 FAM122BQ7Z309 247 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 KIAA0907Q7Z7F0 614 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 BPHLQ86WA6 291 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 MR1Q95460 341 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 KLF16Q9BXK1 252 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ACTL7AQ9Y615 435 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 FAM221BA6H8Z2 402 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 RD3LP0DJH9 198 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 CPT2P23786 658 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 TPMTP51580 245 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 RPS21P63220 83 aaKnown RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 KIAA0895LQ68EN5 471 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 FAM173AQ9BQD7 235 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 POLHQ9Y253 713 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ANKRD34BA5PLL1 514 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 CLINT1Q14677 625 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 GCNT2Q8N0V5 402 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 CCDC74BQ96LY2 380 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 HIPK2Q9H2X6 1198 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ZGRF1Q86YA3 2104 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 HIDE1A8MVS5 230 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 UBL4AP11441 157 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 UBE2G2P60604 165 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 TAF9Q16594 264 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 DUSP6Q16828 381 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 OR7G3Q8NG95 312 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 C20orf24Q9BUV8 137 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 V9GY05 133 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 SLC16A6O15403 523 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 NDUFB2O95178 105 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ZNF44P15621 663 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 G0S2P27469 103 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 GIPRP48546 466 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ACSM3Q53FZ2 586 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 RNLSQ5VYX0 342 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 B3GLCTQ6Y288 498 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 LAX1Q8IWV1 398 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 C11orf49Q9H6J7 331 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 APLNRP35414 380 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 HOXA1P49639 335 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 NSDHLQ15738 373 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 SHEQ5VZ18 495 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 ABHD12BQ7Z5M8 362 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-201ENST00000295550 GALNT9Q9HCQ5 603 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 GHRLQ9UBU3 117 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 IER3IP1Q9Y5U9 82 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 PRSS21Q9Y6M0 314 aa9.2□□□□□ -0.94
COL6A3-201ENST00000295550 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 RAB40ALP0C0E4 278 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 SHC2P98077 582 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 PIP5KL1Q5T9C9 394 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 OTUD1Q5VV17 481 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-201ENST00000295550 RAB40AQ8WXH6 277 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 F2RL3Q96RI0 385 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 STRADBQ9C0K7 418 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 HRASLSQ9HDD0 168 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 VSX1Q9NZR4 365 aaPredicted RBP9.19□□□□□ -0.94
COL6A3-201ENST00000295550 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 AADACL3Q5VUY0 350 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 PGBD5Q8N414 524 aa9.19□□□□□ -0.94
COL6A3-201ENST00000295550 GPR26Q8NDV2 337 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms