RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 GPR45Q9Y5Y3 372 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ACTL7AQ9Y615 435 aa10.02□□□□□ -0.81
PKNOX1-201ENST00000291547 ZNF840PA6NDX5 716 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GJE1A6NN92 205 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 IL2RGP31785 369 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GATMP50440 423 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 LBX1P52954 281 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 KIAA1024LP59773 190 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 TEKQ02763 1124 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 HTR4Q13639 388 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ZNF74Q16587 644 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 UPP1Q16831 310 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 MPEG1Q2M385 716 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SLC35F3Q8IY50 421 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 PRR22Q8IZ63 422 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 BTF3L4Q96K17 158 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 FOXN4Q96NZ1 517 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 HCAR1Q9BXC0 346 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 NDRG3Q9UGV2 375 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ARID1BQ8NFD5 2236 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 CDHR4A6H8M9 788 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 A6NCN8 305 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ZP3P21754 424 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 BCKDHBP21953 392 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 TSFMP43897 325 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 XCR1P46094 333 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 DUSP3P51452 185 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 TLE4Q04727 773 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SERTAD2Q14140 314 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 APCDD1Q8J025 514 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ARL6IP6Q8N6S5 226 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 CPNE4Q96A23 557 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ELOVL3Q9HB03 270 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SLC39A9Q9NUM3 307 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SLC6A14Q9UN76 642 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 POLR2AP24928 1970 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 METTL15A6NJ78 407 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ACOD1A6NK06 481 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GABRR3A8MPY1 467 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 CBX7O95931 251 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SYN1P17600 705 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GCH1P30793 250 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 PTGER1P34995 402 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 APLNRP35414 380 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 POLR2IP36954 125 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 THBS3P49746 956 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 TAS2R46P59540 309 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 HNF4GQ14541 408 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 OR7A5Q15622 319 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 LEXMQ3ZCV2 418 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SBSNQ6UWP8 590 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 LURAP1LQ8IV03 231 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 FAM58AQ8N1B3 248 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 OR5AR1Q8NGP9 310 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 MRPL38Q96DV4 380 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SAT2Q96F10 170 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 IGSF21Q96ID5 467 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SFXN2Q96NB2 322 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 TSSK2Q96PF2 358 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GPR174Q9BXC1 333 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GALNT9Q9HCQ5 603 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 DMRT3Q9NQL9 472 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ACOXLQ9NUZ1 547 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ZNF281Q9Y2X9 895 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 PPP6CO00743 305 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ACOT8O14734 319 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ALPLP05186 524 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 APEHP13798 732 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 S100A11P31949 105 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 CD68P34810 354 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 GPLD1P80108 840 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SOX4Q06945 474 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 KIAA0141Q14154 515 aaPredicted RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 UBE2NLQ5JXB2 153 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 MARCH8Q5T0T0 291 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 RPL22L1Q6P5R6 122 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ZNF836Q6ZNA1 936 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 CLRN3Q8NCR9 226 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 C3orf30Q96M34 536 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SORCS2Q96PQ0 1159 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SERINC2Q96SA4 455 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 PKMYT1Q99640 499 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 SORBS1Q9BX66 1292 aaKnown RBP10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ACPTQ9BZG2 426 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 ZNF286AQ9HBT8 521 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 IL26Q9NPH9 171 aa10.01□□□□□ -0.81
PKNOX1-201ENST00000291547 TCRBV21S2A2A0A5A6 115 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 ZBTB42B2RXF5 422 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 SULT2B1O00204 365 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 SLC43A1O75387 559 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 SIX6O95475 246 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 SMAD2Q15796 467 aaKnown RBP10□□□□□ -0.81
PKNOX1-201ENST00000291547 AANATQ16613 207 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 ATPAF1Q5TC12 328 aaPredicted RBP10□□□□□ -0.81
PKNOX1-201ENST00000291547 SHEQ5VZ18 495 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 ZNF765Q7L2R6 523 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 HSD17B11Q8NBQ5 300 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 TMEM40Q8WWA1 233 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 RNF170Q96K19 258 aa10□□□□□ -0.81
PKNOX1-201ENST00000291547 CST5P28325 142 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms