RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 UQCC2Q9BRT2 126 aa14.24□□□□□ -0.13
SHROOM4-201ENST00000289292 CNTNAP3Q9BZ76 1288 aa14.24□□□□□ -0.13
SHROOM4-201ENST00000289292 PLEKHA3Q9HB20 300 aa14.24□□□□□ -0.13
SHROOM4-201ENST00000289292 HHLA2Q9UM44 414 aa14.24□□□□□ -0.13
SHROOM4-201ENST00000289292 PKD1L3Q7Z443 1732 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 ZNF28P17035 718 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 EXOSC6Q5RKV6 272 aaKnown RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 OTUD1Q5VV17 481 aaPredicted RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 WBP2NLQ6ICG8 309 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 TMPPEQ6ZT21 453 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 IL1F10Q8WWZ1 152 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 ACSS1Q9NUB1 689 aaPredicted RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 PLCXD1Q9NUJ7 323 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SDHAF2Q9NX18 166 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SLC35A3Q9Y2D2 325 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 A0A1B0GTL3 188 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 H3BNC9 293 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 KLKB1P03952 638 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 MELKQ14680 651 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 LRRC56Q8IYG6 542 aaPredicted RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 CPXM2Q8N436 756 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 OR5D18Q8NGL1 313 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 CHTF18Q8WVB6 975 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 RADILQ96JH8 1075 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 FAM86C1Q9NVL1 165 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 A6NIZ1 184 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 JMJD7P0C870 316 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 CD79AP11912 226 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 CD1EP15812 388 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 HNRNPA2B1P22626 353 aaKnown RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SLC6A8P48029 635 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 NDUFA6P56556 154 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 RAP1BP61224 184 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 RAP1AP62834 184 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 TMEM31Q5JXX7 168 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 HIST2H3PS2Q5TEC6 136 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 TMUB2Q71RG4 321 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 MCATQ8IVS2 390 aaKnown RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 ZBTB44Q8NCP5 570 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 AMDHD1Q96NU7 426 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 A0A0D9SG52 128 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SUOXP51687 545 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 HNRNPA1L2Q32P51 320 aaKnown RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SLX4IPQ5VYV7 408 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 FAAP20Q6NZ36 180 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 OR56B2PQ8NGI1 322 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 ADAMTS18Q8TE60 1221 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SLC41A2Q96JW4 573 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 SLC6A14Q9UN76 642 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 APBB3O95704 486 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 RABIFP47224 123 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 GPLD1P80108 840 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 POU3F1Q03052 451 aaPredicted RBP14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 YIF1BQ5BJH7 314 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 DYNC2LI1Q8TCX1 351 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 C20orf24Q9BUV8 137 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 NIPAL2Q9H841 368 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 PLEK2Q9NYT0 353 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 NME7Q9Y5B8 376 aa14.23□□□□□ -0.13
SHROOM4-201ENST00000289292 A0A0B4J203 849 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PRAMEF27A3QJZ7 478 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 TRABD2BA6NFA1 517 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 K7EPK0 472 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 TNFRSF17Q02223 184 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 AKR1C1Q04828 323 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 RPE65Q16518 533 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PRAMEF9Q5VWM5 478 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 KANSL1Q7Z3B3 1105 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 OR6V1Q8N148 313 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 FAM71E2Q8N5Q1 922 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PLPP7Q8NBV4 271 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 DNAAF1Q8NEP3 725 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 WSB2Q9NYS7 404 aaPredicted RBP14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 A0A1W2PS29 197 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 UNCXA6NJT0 531 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 HIDE1A8MVS5 230 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 CX3CR1P49238 355 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 MRPL49Q13405 166 aaKnown RBP14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 YOD1Q5VVQ6 348 aaPredicted RBP14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PLCXD3Q63HM9 321 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 MFSD9Q8NBP5 474 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 OR5L2Q8NGL0 311 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 TAAR2Q9P1P5 351 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 LILRB3O75022 631 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 SERPINA7P05543 415 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PXNP49023 591 aaPredicted RBP14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 ARHGAP19Q14CB8 494 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 BCL2A1Q16548 175 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 LINC00346Q8IVM7 164 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 RIMKLAQ8IXN7 391 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 NEURL3Q96EH8 262 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 DDOQ99489 341 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PDCD1LG2Q9BQ51 273 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PSD2Q9BQI7 771 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 PARP12Q9H0J9 701 aaKnown RBP14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 MED16Q9Y2X0 877 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 UBL3O95164 117 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 RD3LP0DJH9 198 aa14.22□□□□□ -0.13
SHROOM4-201ENST00000289292 NKAIN4Q8IVV8 208 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms