RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ARHGAP11AQ6P4F7 1023 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ATRAIDQ6UW56 229 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 TMUB2Q71RG4 321 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MTSS1LQ765P7 747 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DGLUCYQ7Z3D6 616 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 LURAP1LQ8IV03 231 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR10H4Q8NGA5 316 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SPPL3Q8TCT6 385 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 RSC1A1Q92681 617 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 BPIFA2Q96DR5 249 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SLC38A3Q99624 504 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 UTP23Q9BRU9 249 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 MRI1Q9BV20 369 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 TRPV4Q9HBA0 871 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GPN1Q9HCN4 374 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 CA10Q9NS85 328 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MED11Q9P086 117 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MED31Q9Y3C7 131 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ARPC1BO15143 372 aaKnown RBP9.54□□□□□ -0.88
SKA1-201ENST00000285116 CREBL2O60519 120 aaPredicted RBP9.54□□□□□ -0.88
SKA1-201ENST00000285116 SDC3O75056 442 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 HIST1H2ABP04908 130 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 C5AR1P21730 350 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 PTGER1P34995 402 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 BTN3A2P78410 334 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SLC3A1Q07837 685 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 PABPC1L2AQ5JQF8 200 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 UBE2NLQ5JXB2 153 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SLC25A25Q6KCM7 469 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 HIST3H2AQ7L7L0 130 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 PRSS45Q7RTY3 260 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 CDRT4Q8N9R6 151 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SMPDL3BQ92485 455 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 HIST1H2ACQ93077 130 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SMIM19Q96E16 107 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 MRPS24Q96EL2 167 aaKnown RBP9.54□□□□□ -0.88
SKA1-201ENST00000285116 C4orf36Q96KX1 117 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 ZNF69Q9UC07 566 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 FBXL3Q9UKT7 428 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 RCE1Q9Y256 329 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 COLEC10Q9Y6Z7 277 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SNRPGP15A8MWD9 76 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 OR2T7P0C7T2 308 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 CPMP14384 443 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 RAD52P43351 418 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 MECP2P51608 486 aaKnown RBP9.54□□□□□ -0.88
SKA1-201ENST00000285116 FHL1Q13642 323 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 ISXQ2M1V0 245 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 DCST2Q5T1A1 773 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 OR5M10Q6IEU7 315 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 THSD4Q6ZMP0 1018 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 C17orf47Q8NEP4 570 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 OR5M9Q8NGP3 310 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 OR2T27Q8NH04 317 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 PFN4Q8NHR9 129 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 MYADMQ96S97 322 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SEC22CQ9BRL7 303 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 ENKD1Q9H0I2 346 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 MED20Q9H944 212 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 ZNF304Q9HCX3 659 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 C20orf141Q9NUB4 165 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 SPHK1Q9NYA1 384 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 TAS2R5Q9NYW4 299 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 PCDHGA9Q9Y5G4 932 aaKnown RBP9.54□□□□□ -0.88
SKA1-201ENST00000285116 SLC22A7Q9Y694 548 aa9.54□□□□□ -0.88
SKA1-201ENST00000285116 A0A0B4J2E0 115 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 A0A1B0GX12 115 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 OTOL1A6NHN0 477 aaPredicted RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 SIGLEC6O43699 453 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 SULT1B1O43704 296 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 GPRIN2O60269 458 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 IFNGP01579 166 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ATF1P18846 271 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 FGL2Q14314 439 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 UBXN2BQ14CS0 331 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 CDK5R1Q15078 307 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 CST6Q15828 149 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 MRPL2Q5T653 305 aaKnown RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 MTFR2Q6P444 385 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 RPL22L1Q6P5R6 122 aaKnown RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 ZC3H14Q6PJT7 736 aaKnown RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 GSG1LQ6UXU4 331 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 LINC00114Q6XXX2 140 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 OR4D9Q8NGE8 314 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 FLVCR1-AS1Q8TAF5 88 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 SLC22A18Q96BI1 424 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ASB16Q96NS5 453 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 TBX5Q99593 518 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 MACROD1Q9BQ69 325 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 C6orf106Q9H6K1 298 aaPredicted RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 IL21RQ9HBE5 538 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 SLC39A1Q9NY26 324 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 CPNE7Q9UBL6 633 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 KCNK7Q9Y2U2 307 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 OR1A2Q9Y585 309 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ARPC5O15511 151 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 AQP8O94778 261 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 IL5P05113 134 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms