RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 C9orf135Q5VTT2 229 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 CARD17Q5XLA6 110 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 NIPAL3Q6P499 406 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 ZNF730Q6ZMV8 503 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 WDR88Q6ZMY6 472 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 H1FNTQ75WM6 255 aaPredicted RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 HIST3H2AQ7L7L0 130 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 RRM2BQ7LG56 351 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 NANOGNBQ7Z5D8 188 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 TSPYL5Q86VY4 417 aaPredicted RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 CXorf67Q86X51 503 aaPredicted RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 WFDC8Q8IUA0 241 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 NKAIN4Q8IVV8 208 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 UEVLDQ8IX04 471 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 FAM86B1Q8N7N1 296 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 OR9K2Q8NGE7 335 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 PFN4Q8NHR9 129 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 TMEM239Q8WW34 195 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 HIST1H2ACQ93077 130 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 KISS1RQ969F8 398 aaPredicted RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 MPP4Q96JB8 637 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 CLPTM1LQ96KA5 538 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 MOGAT1Q96PD6 335 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 ZNF385AQ96PM9 386 aaKnown RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 SEPHS2Q99611 448 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 TMEM43Q9BTV4 400 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 THTPAQ9BU02 230 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 PTDSS2Q9BVG9 487 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 AMBRA1Q9C0C7 1298 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 POLR2J2Q9GZM3 115 aaKnown RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 ACTR6Q9GZN1 396 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 ENKD1Q9H0I2 346 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 POLR2J3Q9H1A7 115 aaKnown RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 NANSQ9NR45 359 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 PLSCR4Q9NRQ2 329 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 PARPBPQ9NWS1 579 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 JKAMPQ9P055 326 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 PRPF19Q9UMS4 504 aaKnown RBP5.8□□□□□ -1.48
CD44-204ENST00000279452 RASD1Q9Y272 281 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 MED31Q9Y3C7 131 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 CORINQ9Y5Q5 1042 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 FLVCR1Q9Y5Y0 555 aa5.8□□□□□ -1.48
CD44-204ENST00000279452 SVILO95425 2214 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 GCN1Q92616 2671 aaKnown RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 IGKV3D-15A0A087WSY6 115 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 MCIDASD6RGH6 385 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 FTCDNL1E5RQL4 147 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 BLOC1S5-TXNDC5H3BN57 136 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 NPIPB7O75200 414 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 RAD51DO75771 328 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 DIRAS1O95057 198 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 MT-ATP6P00846 226 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 BGLAPP02818 100 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 THY1P04216 161 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 FABP3P05413 133 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 T-ENOLP0DO92 83 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 SAGP10523 405 aaPredicted RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 THRBP10828 461 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 IFI30P13284 250 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 ITGA2P17301 1181 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 ATP6V1B2P21281 511 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 EDNRAP25101 427 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 SSTR2P30874 369 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 HOXC12P31275 282 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 CCKARP32238 428 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 RBM34P42696 430 aaKnown RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 SLC16A1P53985 500 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 UGT2B15P54855 530 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 H3F3AP84243 136 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 SPIBQ01892 262 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 PUDPQ08623 228 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 FAPQ12884 760 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 SLC17A1Q14916 467 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 TRAM2Q15035 370 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 SPATS1Q496A3 300 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 Q6ZT83 130 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 BHLHA15Q7RTS1 189 aaPredicted RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 DHFR2Q86XF0 187 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 MEX3DQ86XN8 651 aaKnown RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 CDK20Q8IZL9 346 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 OFCC1Q8IZS5 231 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 ARHGAP24Q8N264 748 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 OR5J2Q8NH18 312 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 OR52J3Q8NH60 311 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 FAM222BQ8WU58 562 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 S100PBPQ96BU1 408 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 SGTBQ96EQ0 304 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 PYURFQ96I23 114 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 HS6ST2Q96MM7 605 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 OXGR1Q96P68 337 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 ALKBH3Q96Q83 286 aaPredicted RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 SF3B5Q9BWJ5 86 aaKnown RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 TRIM15Q9C019 465 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 GORASP2Q9H8Y8 452 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 KRCC1Q9NPI7 259 aaPredicted RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 DCAF13Q9NV06 445 aaKnown RBP5.79□□□□□ -1.48
CD44-204ENST00000279452 ASB6Q9NWX5 421 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 ZNF226Q9NYT6 803 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 KCNN3Q9UGI6 736 aa5.79□□□□□ -1.48
CD44-204ENST00000279452 CD300AQ9UGN4 299 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms