RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 OSTNP61366 133 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RPL10AP62906 217 aaKnown RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 CDR2Q01850 454 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 CYP24A1Q07973 514 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 KRT81Q14533 505 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 OR1C1Q15619 314 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZBTB6Q15916 424 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 EXOC3L4Q17RC7 722 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZNF699Q32M78 642 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 C2CD6Q53TS8 623 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 MTX3Q5HYI7 312 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ELFN2Q5R3F8 820 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 PPM1LQ5SGD2 360 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 PXDC1Q5TGL8 231 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 AGAP7PQ5VUJ5 663 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZNF776Q68DI1 518 aaPredicted RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 SLC18B1Q6NT16 456 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RHBDF2Q6PJF5 856 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 PRSS57Q6UWY2 283 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 CD300LGQ6UXG3 332 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 DPY19L2P2Q6ZN68 376 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZNF720Q7Z2F6 126 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZNF546Q86UE3 836 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 CACUL1Q86Y37 369 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 MMD2Q8IY49 270 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 SYS1Q8N2H4 156 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 C1orf52Q8N6N3 182 aaKnown RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 CSNK1A1LQ8N752 337 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 HORMAD2Q8N7B1 307 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ARL14EPQ8N8R7 260 aaPredicted RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 LINC00301Q8NCQ3 95 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 C19orf18Q8NEA5 215 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ZNF473Q8WTR7 871 aaKnown RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 CCDC107Q8WV48 283 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 TMEM239Q8WW34 195 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 IRGQQ8WZA9 623 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 DDB2Q92466 427 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 NR4A3Q92570 626 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 SMARCD2Q92925 531 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 VOPP1Q96AW1 172 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 B3GALT6Q96L58 329 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 PPP1R36Q96LQ0 422 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 JSRP1Q96MG2 331 aaPredicted RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 NSMCE3Q96MG7 304 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 AGAP4Q96P64 663 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 MBOAT4Q96T53 435 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 GPR174Q9BXC1 333 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 NPFFR1Q9GZQ6 430 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 GBA3Q9H227 469 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 CXCL16Q9H2A7 254 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ANKRD19PQ9H560 264 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 ASB7Q9H672 318 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 TRIM45Q9H8W5 580 aaPredicted RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 WDR54Q9H977 334 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 FOLH1BQ9HBA9 442 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 PRSS16Q9NQE7 514 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 TECRQ9NZ01 308 aaKnown RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 MYEF2Q9P2K5 600 aaKnown RBP4.04□□□□□ -1.76
CD44-202ENST00000278385 IKZF3Q9UKT9 509 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RAB23Q9ULC3 237 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 RAP2CQ9Y3L5 183 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 FADS3Q9Y5Q0 445 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 STYXL1Q9Y6J8 313 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 MYO9BQ13459 2157 aa4.04□□□□□ -1.76
CD44-202ENST00000278385 COL4A4P53420 1690 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 RALGAPA2Q2PPJ7 1873 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CLUHO75153 1309 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 A0A1W2PP11 408 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 A0A1W2PPV9 198 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 MYMKA6NI61 221 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 NPIPA7E9PJI5 369 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PGRMC1O00264 195 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 TULP2O00295 520 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 RRHO14718 337 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 AIM2O14862 343 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 XRCC2O43543 280 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 AIREO43918 545 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 UGDHO60701 494 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 N4BP1O75113 896 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 ENTPD5O75356 428 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 OAZ2O95190 189 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PAPSS2O95340 614 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 RAB3DO95716 219 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 IGF1P05019 195 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CELA2AP08217 269 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CT62P0C5K7 136 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 NPIPA8P0DM63 369 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CXCL8P10145 99 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 MYL2P10916 166 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PRF1P14222 555 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ZNF43P17038 809 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 KITLGP21583 273 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 MPGP29372 298 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PCK1P35558 622 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CEACAM3P40198 252 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 AQP2P41181 271 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 BRCC3P46736 316 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 P2RY1P47900 373 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms