RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ACVR1BP36896 505 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 GPR143P51810 404 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ILF3Q12906 894 aaKnown RBP eCLIP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 IL10RAQ13651 578 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 GPR18Q14330 331 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF141Q15928 474 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 SLC25A35Q3KQZ1 300 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 BCL2L15Q5TBC7 163 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 IL20RBQ6UXL0 311 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 UNQ9370/PRO34162Q6UXP9 181 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 DPY19L2P2Q6ZN68 376 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 KRT74Q7RTS7 529 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NAXDQ8IW45 347 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CADM2Q8N3J6 435 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 OR14A16Q8NHC5 309 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 GRHL3Q8TE85 626 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ANKRD9Q96BM1 317 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 BMFQ96LC9 184 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CCNL2Q96S94 520 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 TMEM168Q9H0V1 697 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NUDT15Q9NV35 164 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 B3GNT2Q9NY97 397 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NPIPA5A0A0B4J1W7 369 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 A0A0J9YY10 115 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 A0A1B0GVI7 797 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 BLACEA4D250 179 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 EFCAB7A8K855 629 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NPIPA7E9PJI5 369 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ARPC3O15145 178 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 FABP7O15540 132 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CER1O95813 267 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CT62P0C5K7 136 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NPIPA8P0DM63 369 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CLUP10909 449 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CSRP1P21291 193 aaKnown RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 GDI2P50395 445 aaKnown RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NXPH1P58417 271 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 GPLD1P80108 840 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 PSG6Q00889 435 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 EXOSC7Q15024 291 aaKnown RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 PON3Q15166 354 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 FCN2Q15485 313 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CEP78Q5JTW2 689 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 FAM205BPQ63HN1 556 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 RD3Q7Z3Z2 195 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 SLC22A18ASQ8N1D0 253 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 EID2Q8N6I1 236 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CSNK1A1LQ8N752 337 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 TMEM52Q8NDY8 209 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 OR13H1Q8NG92 308 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 OR52E2Q8NGJ4 325 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 OR10G6Q8NH81 332 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 CCL4L1Q8NHW4 92 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 HGDQ93099 445 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 TSACCQ96A04 125 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 PELI1Q96FA3 418 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 ERMAPQ96PL5 475 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 NRIP3Q9NQ35 241 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 UCKL1Q9NWZ5 548 aa11.83□□□□□ -0.52
C9orf3-201ENST00000277198 MRPS2Q9Y399 296 aaKnown RBP11.83□□□□□ -0.52
C9orf3-201ENST00000277198 TP53BP1Q12888 1972 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-201ENST00000277198 ACACBO00763 2458 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 TEX13CA0A0J9YWL9 993 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF860A6NHJ4 632 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 OR5K4A6NMS3 321 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 PDCD5O14737 125 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 SDC3O75056 442 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 RASGRP1O95267 797 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 IGF2P01344 180 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 ATF1P18846 271 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 DIO1P49895 249 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
C9orf3-201ENST00000277198 CRYZQ08257 329 aaKnown RBP11.82□□□□□ -0.52
C9orf3-201ENST00000277198 FGFBP1Q14512 234 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 TCEA2Q15560 299 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF542PQ5EBM4 170 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 LYPD4Q6UWN0 246 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 RPTNQ6XPR3 784 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 BTN2A1Q7KYR7 527 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 FGD2Q7Z6J4 655 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 LUZP2Q86TE4 346 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 CYB561A3Q8NBI2 242 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 OR56B4Q8NH76 319 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 RPS4Y2Q8TD47 263 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 SMIM4Q8WVI0 70 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 OIT3Q8WWZ8 545 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 PEX11GQ96HA9 241 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 GPR137Q96N19 417 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 G6PC3Q9BUM1 346 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 CACNG6Q9BXT2 260 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 SLC19A3Q9BZV2 496 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 OR51J1Q9H342 316 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 FBXL4Q9UKA2 621 aa11.82□□□□□ -0.52
C9orf3-201ENST00000277198 NPIPB9F8W1W9 429 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms