RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 DEFB134Q4QY38 66 aa17.13■□□□□ 0.33
SSC4D-201ENST00000275560 EIPR1Q53HC9 387 aa17.13■□□□□ 0.33
SSC4D-201ENST00000275560 CHST6Q9GZX3 395 aa17.13■□□□□ 0.33
SSC4D-201ENST00000275560 KCNK15Q9H427 330 aa17.13■□□□□ 0.33
SSC4D-201ENST00000275560 INSL6Q9Y581 213 aa17.13■□□□□ 0.33
SSC4D-201ENST00000275560 DNASE2O00115 360 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 RNGTTO60942 597 aaKnown RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 NID1P14543 1247 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 PPP3CBP16298 524 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TAS2R20P59543 309 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 SORDQ00796 357 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 PDZD9Q8IXQ8 264 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 RNF113BQ8IZP6 322 aaKnown RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF619Q8N2I2 560 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 MUC20Q8N307 709 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 GPN1Q9HCN4 374 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 PRSS16Q9NQE7 514 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 V9GY05 133 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TBC1D3KA0A087X1G2 549 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TBC1D3BA6NDS4 549 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TBC1D3FA6NER0 549 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF879B4DU55 563 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 H0YC42 278 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 ACHEP22303 614 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 AK4P27144 223 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 ITPKBP27987 946 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 CEBPEQ15744 281 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 PCGF3Q3KNV8 242 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TBC1D3GQ6DHY5 549 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 RPL22L1Q6P5R6 122 aaKnown RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 PAQR7Q86WK9 346 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 HSPA12BQ96MM6 686 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TMEM138Q9NPI0 162 aa17.12■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF275Q9NSD4 429 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 AKAP7Q9P0M2 348 aaPredicted RBP17.12■□□□□ 0.33
SSC4D-201ENST00000275560 TMEM272A0A1B0GTI8 110 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 NAP1L6A6NFF2 107 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 LRRC72A6NJI9 287 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 ADH5P11766 374 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 ADRA2CP18825 462 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 MST1P26927 711 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 HNRNPA1L2Q32P51 320 aaKnown RBP17.11■□□□□ 0.33
SSC4D-201ENST00000275560 OLFML2AQ68BL7 652 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 COX18Q8N8Q8 333 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 OR4C16Q8NGL9 310 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 OR10Z1Q8NGY1 313 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 DVL3Q92997 716 aaPredicted RBP17.11■□□□□ 0.33
SSC4D-201ENST00000275560 SLC25A28Q96A46 364 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 SLC38A3Q99624 504 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 NPAS1Q99742 590 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF350Q9GZX5 532 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 HAO2Q9NYQ3 351 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 MRTO4Q9UKD2 239 aaKnown RBP17.11■□□□□ 0.33
SSC4D-201ENST00000275560 REV3LO60673 3130 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 A0A1B0GWA3 101 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 OR2L13Q8N349 312 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF416Q9BWM5 594 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 TMPRSS13Q9BYE2 586 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 FBXL3Q9UKT7 428 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 D6RAR5 112 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 NDUFA2O43678 99 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 OR2T7P0C7T2 308 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 C11orf88Q6PI97 169 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 UNQ9370/PRO34162Q6UXP9 181 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 VN1R4Q7Z5H5 301 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 LINC00518Q8N0U6 118 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 OR2T27Q8NH04 317 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 TSSK2Q96PF2 358 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 SLC7A5P2Q9GIP4 190 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 PRDM9Q9NQV7 894 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSC4D-201ENST00000275560 MED9Q9NWA0 146 aa17.11■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF230Q9UIE0 474 aaPredicted RBP17.11■□□□□ 0.33
SSC4D-201ENST00000275560 PAK4O96013 591 aaPredicted RBP17.1■□□□□ 0.33
SSC4D-201ENST00000275560 MAS1P04201 325 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 LAG3P18627 525 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 TM4SF4P48230 202 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 DLX5P56178 289 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 ACTA2P62736 377 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 ACTG2P63267 376 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 ELP2Q6IA86 826 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 ADAMTSL4Q6UY14 1074 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 NUDT18Q6ZVK8 323 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 SLC36A1Q7Z2H8 476 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 CDH26Q8IXH8 852 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 OR8S1Q8NH09 359 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 RASD2Q96D21 266 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 LRRC46Q96FV0 321 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 Q96M85 177 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 F5H5P2 479 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 EGFP01133 1207 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 DBIP07108 87 aaKnown RBP17.1■□□□□ 0.33
SSC4D-201ENST00000275560 VIPR2P41587 438 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 EMDP50402 254 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 RUNX2Q13950 521 aa17.1■□□□□ 0.33
SSC4D-201ENST00000275560 ZNF234Q14588 700 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms